Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02935 ATGAGCAGCAAAAAGGGAAGTTATGAAGAAGTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGATGGTGAGTGGGAAAGTAGTAGTTGTTGCAGTTAAAGCTTCAAGAGAAATTTCAAGAACTGCTTTGGTTTGGGCATTGACTCATGTTGTTCAACCAGGGGATTCCATTAAGCTGTTAGTTGTCATTCCTTTTCTCTCCTCAGGCAAGAGGAATTGGGGATTCTCAAGATTTACCAGTGATTGTACCACTAGTAACTGGAGATCCCACTTAGGAAGCGCTTCAGATCAGAAAGAAATTATTACAAGTTCCTGTTCCCAATTGGTGCTTCAACTCCATGATTTATATGATCCAGACAAGATAAAGATCAGAGTTAAGATTCTTTCGAGTTCTTTATGTGGAGCAGTTGCCATTGAAGCCAAGAGAGTCCACTCAAGCTGGGTTATATTGGACAAAAAATTGAAACAAGAAAAGAAGTGCTGCATGGAGCAGCTGCATTGCAATATTGTAAGTATGAAGCGATCAAGGGCAAAGATTCTGCGCTTGAATTTGAACAGTTCACCGAAGATGGAACTTAATGATGGGGGGTGTTCATTGTCATTGGAGCTGAGTGCATATGCAAAACAAAATCCAGACACAATTAGAGGTCCTGCTGTTACTCCAGCTAGTAGTCCTGAGCAAGGATCGCCGCTATTGACTGCAACTGATATTGGTACCTCATCACTATCGAGCTCAGATCCTAGCACTTCACCATTTTTCCAGAGTGATATTTATGAAAGGCGAAGGCACGAGGGACTGAAAAATCTGGAGTATATTGAATCTGACTCGGAGAGTGAAAAGCTAAGTTTATCTTCAAAAAGTTCATATATTCAGCCCTGGATTGCCAATGTGATTTGTGTTGATGGTGAGGACAGTATGCAAAGGTTCGGCGATCAAGACCCTGTCTTAGGAGTGCTTAATTGTAAGATTGATGTCAACCTAAGCAAAAGTGTTAGAGATGCAATTTCGCTTGCGAGAAATGCACCTCCTGGTCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGCACCTGCATTTGGAAACCCTCCAAGGTGGTTTACCTTTTCCGAATTGCAACTCGCCACGGGTGGTTTTTCACAAGAAAATTTCTTGGCACAAGGTGGTTTTGGTTCTGTACACCGCGGCGTGCTACCGGATGGGCAAGTCATTGCTGTGAAGCAGTATAAATTAGCCAGCACACAAGGTGATAAAGAATTTTGCTCAGAAGTTGAAGTCTTAAGCTGCGCACAACATCGGAATGTTGTGACGCTAATTGGGTTTTGTGTGGAGGATGGTAGAAGATTACTAGTTTATGAATACATATGCAATGGCTCTTTGGATTCTCATCTTTATGGACGAAAACAGAAAGTACTAGAATGGTCTGCTCGGCAAAAAATCGCAGTGGGAGCTGCTCGCGGCTTAAGGTACCTACATGAAGAATGCAGAGTGGGATGTATTGTGCACCGTGATATGCGACCTAACAATATCCTCGTTACTCATGATTTTGAAGCACAGGTGGGAGATTTTGGACTTGCTAGGTGGCAACCTGATGGAGATTTGGGTGTGGAAACCAGGGTCATAGGAACATTTGGGTATTTGGCGCCAGAATATGCTCAAAGTGGGCAAATAACAGAGAAAGCTGATGTGTATTCATTTGGAATAGTGCTATTGGAGCTTGTAACAGGAAGGAAAGCCATTGATATAAACCGCCCCAAAGGCCAGCAATGCCTCAGTGAATGGGCACGGCCATTGCTTGAACTTAAACATGAAGAAGCAGAAGCGAGAGAAGAGCTAGTTGATCCTATAATATGGAAAGGGAAAGGGTATATTGCTAAAGAGGTTAATCGAATGTTGCAATGTTGCTCCTTGTGCATCCGAAGAGACCCTCATTCAAGGCCCAGAATGTCTCAGGTGCTAAGGATGCTGGAAGAATGA 1977 0.4299 MSSKKGSYEEVEEEEEEEEEEEMVSGKVVVVAVKASREISRTALVWALTHVVQPGDSIKLLVVIPFLSSGKRNWGFSRFTSDCTTSNWRSHLGSASDQKEIITSSCSQLVLQLHDLYDPDKIKIRVKILSSSLCGAVAIEAKRVHSSWVILDKKLKQEKKCCMEQLHCNIVSMKRSRAKILRLNLNSSPKMELNDGGCSLSLELSAYAKQNPDTIRGPAVTPASSPEQGSPLLTATDIGTSSLSSSDPSTSPFFQSDIYERRRHEGLKNLEYIESDSESEKLSLSSKSSYIQPWIANVICVDGEDSMQRFGDQDPVLGVLNCKIDVNLSKSVRDAISLARNAPPGPPPLCSICQHKAPAFGNPPRWFTFSELQLATGGFSQENFLAQGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVTLIGFCVEDGRRLLVYEYICNGSLDSHLYGRKQKVLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILVTHDFEAQVGDFGLARWQPDGDLGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAIDINRPKGQQCLSEWARPLLELKHEEAEAREELVDPIIWKGKGYIAKEVNRMLQCCSLCIRRDPHSRPRMSQVLRMLEE 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02935 658 CDD STKc_IRAK 385 658 - -
Aip03g02935 658 MobiDBLite consensus disorder prediction 213 251 - -
Aip03g02935 658 Pfam Protein kinase domain 381 654 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02935 658 ProSiteProfiles Protein kinase domain profile. 379 658 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02935 658 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g02935 658 Coils Coil 1 21 - -
Aip03g02935 658 Gene3D Phosphorylase Kinase; domain 1 351 454 - -
Aip03g02935 658 PANTHER OS01G0253100 PROTEIN 311 657 IPR045271 GO:0004714|GO:0006468
Aip03g02935 658 PANTHER OS01G0253100 PROTEIN 24 307 IPR045271 GO:0004714|GO:0006468
Aip03g02935 658 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 311 657 - -
Aip03g02935 658 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 24 307 - -
Aip03g02935 658 ProSitePatterns Tyrosine protein kinases specific active-site signature. 500 512 IPR008266 GO:0004672|GO:0006468
Aip03g02935 658 Gene3D Transferase(Phosphotransferase) domain 1 455 658 - -
Aip03g02935 658 SUPERFAMILY Protein kinase-like (PK-like) 360 656 IPR011009 -
Aip03g02935 658 MobiDBLite consensus disorder prediction 217 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02935 Aip-Chr3 83035427 83038741 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02935 341 652 Trihelix Transcription Factor Family AT1G68690 50.321 3.74e-101 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip03g02935 Pkinase 6.1e-44 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02935 03 83035427 83038741 Aip03g02935 03 83035427 83038741 ECH