Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02925 ATGGTGGAAAAGACCAAGGGTAGGAAGGAAGAGGTTGTTACTCGAGAGTACACCGTCAACCTCCACAAACGCTTACATGGCTGCACCTTCAAGAAGAAGGCTCCTAAAGCAATAAAGGAGATAAGGAAGTTTGCTCAGAAGGCCATGGGGACTAATGATGTGAGAGTGGATGTGAAGCTGAACAAGTTTGTGTGGAGCCAGGGGATCCGGAGTGTACCCAGAAGGATCCGGGTGCGCATTTCCCGCAAGAGGAACGACGATGAGGATGCAAAGGAAGAGCTTTACTCCCTTGTCACAGTTGTTGAAATCCCTAAGGAAGAGCTTAGAGAGAAGCAGAAACGTAAAAGAGACATGGAGATAAACTGCGAGACATCACACCTAAAAGAGAAGCAGAGAAGCAGAAACGACGTTGACGAGGAAGGGAGAAGCAGAAACGACAAGGAGGGGAGAAGCAAAAACGACGCAGGGGAGGAAGGGAGAAGCAGCGACGACCCACGACGAGGAGTGGAGATGCGGCGACGATGA 525 0.5029 MVEKTKGRKEEVVTREYTVNLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTNDVRVDVKLNKFVWSQGIRSVPRRIRVRISRKRNDDEDAKEELYSLVTVVEIPKEELREKQKRKRDMEINCETSHLKEKQRSRNDVDEEGRSRNDKEGRSKNDAGEEGRSSDDPRRGVEMRRR 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02925 174 CDD Ribosomal_L31e 9 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Aip03g02925 174 Pfam Ribosomal protein L31e 11 92 IPR000054 GO:0003735|GO:0005840|GO:0006412
Aip03g02925 174 ProSitePatterns Ribosomal protein L31e signature. 54 68 IPR020052 GO:0003735|GO:0005840|GO:0006412
Aip03g02925 174 SUPERFAMILY Ribosomal protein L31e 11 92 IPR023621 -
Aip03g02925 174 PANTHER 60S RIBOSOMAL PROTEIN L31 1 112 IPR000054 GO:0003735|GO:0005840|GO:0006412
Aip03g02925 174 Gene3D - 2 117 IPR023621 -
Aip03g02925 174 PANTHER 60S RIBOSOMAL PROTEIN L31-2-RELATED 1 112 - -
Aip03g02925 174 MobiDBLite consensus disorder prediction 106 174 - -
Aip03g02925 174 SMART Ribosomal_L31e_2 10 93 IPR000054 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02925 Aip-Chr3 81881188 81883236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02925 2 108 Cytoplasmic Ribosomal Protein Gene Family AT2G19740 81.308 7.78e-60 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02925 K02910 - gmx:100810835 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02925 03 81881188 81883236 Aip03g02925 03 81881188 81883236 ECH