Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02918 ATGGATAATGATGGCAAAGAGTCATATAAGGATGGTGATCAATCTGAGGATTTAAGTGTTGAGTATGAGTGCAGTTCCGATGAAAGTGATGATATGGTGGATGTAACTGTAGATGAAGCAGAGGCAAATATAATTAATACTAATGGTTTTGAAAAGTTGATAACTGATTTTACCATCGAAGATATATGGAGATTGGTGTTTGATACAGAATCTCAAGTTTGTGAATTTTATGCCAAATATGCCAAGTGCTATGGATTTGTGTCCCAAAAAGACTTGAAGACGGTGGATGCTAATGGTAACATTAATACAAGACAGTTGGTTTGCAATAAAGCAGGAGAAAGATATTGGAAGCACCTTAAAAGGGACAATCGGCAAAGGGAGCATAGGGCAATTACTCGTGTCAACTGCAGGGCTAGGATTCGGTTCATTCGTCACTATAAAACGGGTAAGTGGAAAGTCAGTGTCTTTGAGAGTGAACACAATCATCCACTGTGTCCACCTAAGTACAGACATCTTATTGCCGCGAATCGTGGGCTTATTGAGGCTGATAAAACACAAACAGACAACTTGCGAGCATGTGGTGTTAAAACTTGCCACATAATGGGTTACATGGTTTTCCAAAAAGGTGGATATGATAAAGTGGGTTTTACCAGAAAAGACTTACATAACCACATTAGTAAGACTAGGCATGACAAAGTGAAAGACAGTGATGCATTTGTTGCGTTGGCCTATCTGTTTTCTAAGGTAGACAGTGACCCGTTATTTCTAGGAAAGTTCACCTTAAAGGATGGTAGGTTGGATAATTTGGTGTGGGCTGATGGAGAAAGCGTTGTTGACTACGAATGTTTTGGCGATGTACTGGCTTTTGACGCCACTTACAAGAAAAATGTATACAACAAGCCCTTAGTCATATTTTCAGGGACCAACCACCATGGCCAGACAACTATCTTTGGATGCGCTCTGCTCTCAGATAAAAGGTCCGAAACTTTCAAGTGGGCACTGAAAGAATTTTTGGAAATCATGTCAGAAAAACTACCCGGAGGCGTTGTGACAGACGGAGACCGTGCTATGAGAGAGGCTATCTTAGAAGTATTTCCTGCAGCAGGTGCCTTAAATGTGACTGAATGCCCAAACAGTGGAGATATTATTGAGTGCAACACGAGTGAGTATTTTAATCAGCAATGGGAATTTAAAGTATCTTACAATAAAGACAAGGACCTGTTTGCATGTGAGTGCAGGCTATTTGAGACTCGTGGATTACCGTGCTCCCATATCTTTGGGGTCTTAAAGCATCGCAATGCAAAATGCGTACGTACATCTTTTATCCTGAAAAGATGGACAAGAGATGCAAAGAGTGATTTTATATGCTCAATTGGCGAGCAAGACACCGCTGATGATATAGTGCCCACACATAGATGCGGTGCAATGGCATCTATTTGTTGGAAGCTTTGTGATATTTCTTCCAAAAATTCAGCCAATTATAGGGAAATCTCAGGTGAGTTACTTAAGCTAATTTCGAAGGTGCAAAATAAAGGTGATGCACAAGCGAGGCGGCTTTCCTCCACGTCAGCGCTAATAGGTGATCCAGCTGTTGTGAAGTCAAAAGGGGCTCCAAGAAAGGTTCCAAAAGGCCAAAAGAGGCGAAGATGTTCGCATTATAAGTCAAGCAGGCATTTCGTTAGGACATGTCCATTACTCGCCAAGGAGGACTCCCCCGCCGAATACTCAAATGCTGAAGATGAACCAATGATATTAATATAA 1761 0.4128 MDNDGKESYKDGDQSEDLSVEYECSSDESDDMVDVTVDEAEANIINTNGFEKLITDFTIEDIWRLVFDTESQVCEFYAKYAKCYGFVSQKDLKTVDANGNINTRQLVCNKAGERYWKHLKRDNRQREHRAITRVNCRARIRFIRHYKTGKWKVSVFESEHNHPLCPPKYRHLIAANRGLIEADKTQTDNLRACGVKTCHIMGYMVFQKGGYDKVGFTRKDLHNHISKTRHDKVKDSDAFVALAYLFSKVDSDPLFLGKFTLKDGRLDNLVWADGESVVDYECFGDVLAFDATYKKNVYNKPLVIFSGTNHHGQTTIFGCALLSDKRSETFKWALKEFLEIMSEKLPGGVVTDGDRAMREAILEVFPAAGALNVTECPNSGDIIECNTSEYFNQQWEFKVSYNKDKDLFACECRLFETRGLPCSHIFGVLKHRNAKCVRTSFILKRWTRDAKSDFICSIGEQDTADDIVPTHRCGAMASICWKLCDISSKNSANYREISGELLKLISKVQNKGDAQARRLSSTSALIGDPAVVKSKGAPRKVPKGQKRRRCSHYKSSRHFVRTCPLLAKEDSPAEYSNAEDEPMILI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02918 586 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 367 IPR031052 GO:0006355
Aip03g02918 586 SMART 26again6 408 435 IPR006564 GO:0008270
Aip03g02918 586 Pfam FAR1 DNA-binding domain 75 165 IPR004330 -
Aip03g02918 586 PANTHER OS02G0262500 PROTEIN 61 367 - -
Aip03g02918 586 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g02918 586 ProSiteProfiles Zinc finger SWIM-type profile. 397 433 IPR007527 GO:0008270
Aip03g02918 586 MobiDBLite consensus disorder prediction 1 17 - -
Aip03g02918 586 Pfam MULE transposase domain 286 368 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02918 Aip-Chr3 81185129 81187385 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02918 FAR1 1e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02918 - - aip:110269479 760.37