Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02895 ATGTGTCAGAAAAAGCTACCCCATGCACATTCAGATCCAGTGGTTCAGGATCAACATAATATTTGTGCAGGTCTGGCTCCTGATTCAAACCCAAGTTACCATAGTCTCCCTATGAATGACAATTCAAAAGCGCAGGCAACAAATAAAGTTGTAGTAACTACAGCAACACCAGAAGGCATGGTTGAGCAAGTAGTTGGGACCAGACCCATGATTGTTGGCAAGTCTGAGCTTGGAGCAATGCATTATAAAGAAGCAACTGTGCTGTCCTGTAATCTTGGGTCAGAGCCTGAAGGTGAGAGGCATTTCTCACAGAAGCCAGACAATTTGGATCACCAGAATACAATTGTCAAGGGAACAATTGTAGGAGCTGGTGAAAAACAGTTACTAAATGCTGGTCGCACAGGAACAGCACCACTGCCTTATCTAGATGATGTTGTCTGCCAACATGTGATTCCAGTAGAAAACTGGGCTAAAGAAGATGTAATTGTTAATAAACCTATTACTGCTGATATGCCTTTAGTTGGTTGCGCATCTGTTGAAACTTCTCAGTGTACAGTTCAAGAATCTGCAAAAGGTTATACCAATGAACTCACTAGCATTGTTTCAAAAGCAGATATTGTGGAGAATTGGATTGCAAAGGACCATCTCAAACCTGTTGATTTAAGGGTGGAACCCCTCAAGATAATCAATCCTGAAAGTTATGCAGACAAACCTGAAGTTCATGCAAGTTATGATAAAGTAGATCACAGTACTCAGTGTTCTGTAGAGAAGAAAGGGGCTTTGGATAACAACCTTAGTAGATCAAAGTTGGATGTCGACGCAAATCAAATTAATACGATGGATGTACTTCCTAGTTTTATTATGGAAGTTCCGTACGGTAATAATTCCAGGCCAGCAGATTATAATGAGGTTGCCCAACCCCATGTTCCGGGCATTCCTAATTCAAATCCTCAATCGAAAGAAGGTAATCACAAGGGTGATGTATTCTCATCTTCGACTTCACCATCTGTCAGGTTTGGAGATGCACAGGATTCTTCAAACTCACTTTTTAGCAATCAGGATCCATGGAATATACACGGCTCGTACTTTCCACCACCTAGACCTAAAAAAATTGCATTAGAGAAAGAACATTATTCTTATAAGGACCAGTTTGGTGAGAATCCAGGCAACAGTGCTGAACAGAATGTAGCAGCTCCATTGGATAATGGCCTGGCATTCAAACAGAATTTAGCTTTGGAAGATGCTCGATCTGCCAAGGGATCATCCCAGGACCAACAGCTTCAAGCAGTTGCTGAAGGCGTAGCTGCTTCTGTTCTGCACTCGAGCATTCCTTCAAATCCTGAATTGCATGCCAGAGATGTTTCCTTTCGTGGAGAGACAGAAGATGGATATGTTCAAAATAGTGAAATAGATGTACAGTGTAAAAGTACAGCACAGGATGTAGAGAGCAAGCTTCCAGAGAAGGCAAATTTTGGTTTTCCAATTACAGATCTTGGAGCATTGCAGGTTATAAAGAATTGTGACCTTGAAGAGCTGGTAGAATTGGGCTCTGGGACCTTTGGTACTGTATATCATGGAAAATGGAGGGGCACGGATGTTGCAATAAAGCGGATTAATGATCGTGTACCTTGTTCATGGTTATGCTACAAGCAGAGAGCTGACTTTTGGAATGAAGCAATCAAGCTAGCTGACTTGCACCATCCAAATGTGGTAGCTTTTTATGGTGTTGTGCTTGATGGTCCAGGAGGTTCTGTTGCTACAGTAACTGAGTATATGGTTAATGGCTCTCTTAGAAATGCCTTGCAGAAGAATGAGAGGAATCTTGACAAGCGCAAGCGTCTTTTGATTGCTATGGACGTAGCTTTTGGTATGGAATACCTACACGGGAAAAACATAGTACACTTCGACTTGAAAAGTGACAACTTACTTGTGAATCTGCGAGATCCACACCGCCCAATATGCAAGGTTGGTGACCTTGGTCTATCAAAAGTGAAATGTCAGACCCTGATATCTGGGGGTGTGAGAGGAACTCTACCCTGGATGGCCCCAGAACTCTTGAATGGAAGTAGCAGCCTTGTCTCAGAGAAGGTTGATGTGTTTTCATTTGGTATTGTCCTGTGGGAACTTCTCACTGGAGAAGAGCCATATGCTGACTTGCACTATGGAGCTATCATAGGGGGTATTGTGAGCAACACTTTAAGGCCTCCAGTTCCAGAAACCTGTGATCCGGAATGGCGATTACTGATGGAGCGGTGCTGGTCATCTGAGACATCAGAAAGACCAACCTTCACTGAGGTCGCCAATGAATTACGCCAGATGGCAGCCAAGGTCTCCCCCAAAGGACAAAATCAATAG 2355 0.4306 MCQKKLPHAHSDPVVQDQHNICAGLAPDSNPSYHSLPMNDNSKAQATNKVVVTTATPEGMVEQVVGTRPMIVGKSELGAMHYKEATVLSCNLGSEPEGERHFSQKPDNLDHQNTIVKGTIVGAGEKQLLNAGRTGTAPLPYLDDVVCQHVIPVENWAKEDVIVNKPITADMPLVGCASVETSQCTVQESAKGYTNELTSIVSKADIVENWIAKDHLKPVDLRVEPLKIINPESYADKPEVHASYDKVDHSTQCSVEKKGALDNNLSRSKLDVDANQINTMDVLPSFIMEVPYGNNSRPADYNEVAQPHVPGIPNSNPQSKEGNHKGDVFSSSTSPSVRFGDAQDSSNSLFSNQDPWNIHGSYFPPPRPKKIALEKEHYSYKDQFGENPGNSAEQNVAAPLDNGLAFKQNLALEDARSAKGSSQDQQLQAVAEGVAASVLHSSIPSNPELHARDVSFRGETEDGYVQNSEIDVQCKSTAQDVESKLPEKANFGFPITDLGALQVIKNCDLEELVELGSGTFGTVYHGKWRGTDVAIKRINDRVPCSWLCYKQRADFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKNERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVLWELLTGEEPYADLHYGAIIGGIVSNTLRPPVPETCDPEWRLLMERCWSSETSERPTFTEVANELRQMAAKVSPKGQNQ 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02895 784 MobiDBLite consensus disorder prediction 309 352 - -
Aip03g02895 784 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 26 328 - -
Aip03g02895 784 SMART serkin_6 509 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02895 784 CDD STKc_MAP3K-like 515 770 - -
Aip03g02895 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Aip03g02895 784 Gene3D Phosphorylase Kinase; domain 1 502 594 - -
Aip03g02895 784 PANTHER SERINE-THREONINE PROTEIN KINASE 323 777 - -
Aip03g02895 784 PRINTS Tyrosine kinase catalytic domain signature 626 644 IPR001245 GO:0004672|GO:0006468
Aip03g02895 784 PRINTS Tyrosine kinase catalytic domain signature 589 602 IPR001245 GO:0004672|GO:0006468
Aip03g02895 784 PRINTS Tyrosine kinase catalytic domain signature 741 763 IPR001245 GO:0004672|GO:0006468
Aip03g02895 784 PRINTS Tyrosine kinase catalytic domain signature 697 719 IPR001245 GO:0004672|GO:0006468
Aip03g02895 784 PANTHER SERINE-THREONINE PROTEIN KINASE 26 328 - -
Aip03g02895 784 Pfam Protein tyrosine and serine/threonine kinase 513 770 IPR001245 GO:0004672|GO:0006468
Aip03g02895 784 ProSiteProfiles Protein kinase domain profile. 509 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02895 784 MobiDBLite consensus disorder prediction 305 352 - -
Aip03g02895 784 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 323 777 - -
Aip03g02895 784 ProSitePatterns Protein kinases ATP-binding region signature. 515 536 IPR017441 GO:0005524
Aip03g02895 784 Gene3D Transferase(Phosphotransferase) domain 1 595 784 - -
Aip03g02895 784 SUPERFAMILY Protein kinase-like (PK-like) 503 769 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02895 Aip-Chr3 79686235 79692349 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02895 317 782 MAP Kinase Kinase Kinase AT3G46920 62.236 0.0 554
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Aip03g02895 PK_Tyr_Ser-Thr 3.8e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02895 - - ahf:112732322 1565.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03248 01 135654360 135660024 Aip03g02895 03 79686235 79692349 PCT
Aip01g03108 01 134251903 134257813 Aip03g02895 03 79686235 79692349 PCT