Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02894 ATGAACCTAGTGCCGATCTTGAGCGCGACGAGCAGCGACGGTGAGATTGATGGCGGTGCGATGGGGCTAGGGTTTTCACATCTTTTCAAGGGAGAGCTGCAAAGATGGACGGACGACGGTAGAAGCGCGACTAAGGGAGACGAGCAGACACGTGAGACGGTGACAGTGGCGCAAGACGACGGAGGGCACAACGACGGGGAGATTGGAGAAGCGGCTAGGGTTTTGTTATTTGGTGCTTTGGTTTTGTTATCCTTCGACGACCCGATCAACCGCTTTCTCTCTCTATCTTATCACTCTCTGACAGTGCATCGTTCTCTGTCTTTCGCAGCCATGGCATTTGATCAAACCTCTGTTCCCTGCGATCTAAGATCACTAAATGTTACTCGAGCTGCGGCCGAAGAGCCACTCGTTCCTCCTGCTAGTAAACCGCTTCAAACTGCAGAATATTTCCCTCCAAATTCGGTTTGGGACCATGTTAGCTCTGGTGCGGTGCCGCTTGTCTACCCTGCGTCTGTCTCTGATGCTGGTTTGGTTAGAATAGCGTACGGAAATGTAACTTCGGCTATTGCTTCTCCTACCTGGTGTGTTCGTCCTGCTGTTCCGGTTCACCCCACTGTAAACCCCGCTGTTGGGCTTAATTATGGTTCAGGTTTTGCCAATCGGTTCATGGGAGCCAATGCCGTTGATCTTTTGGGTAGTGTGGTTGCGGCTTCCCATGGATATCCTATTAATTTGGGAAATTCGGTTTCTGGTAATGGCTTTGATAATGCCCTTCCTGGCAGCAGCAGGGTGGTTGGAAATGCTGTTCATCAGATAGGTGGTGCTGTTGTACCAGGCGGGATTGGTTTTGGTTCCTCTCTCAGAACTGATCAAGGCAGTAATGAGGGCATGAATGACTCAGTATCTGGGCAAAAAATGAAGCTATTGTGCAGCTATGGTGGTAAGATTTTGCCTAGACCCTGTGATGGAAAATTGAGGTATGTTGGGGGGCAAACAAGGATCATTAGTGTTAGGAGAGGCACGAGCTTCAATGAATTGGCACAAAAGATGACTGATACGTATGGGCAGCCTGTGGTTATCAAGTATCAGCTCCCTGATGAGGATCTTGATGCATTGGTTTCGGTTTCCTGCCCTGAGGATCTTGATAATATGATGGAGGAGTATGAAAAATTGATTGAAAGGTCTCCTGATGGCTCTGCTAAATTAAGGGTCTTTCTGTTTTCTGCTTCAGAACTTGATCCTTCTGGTGTGGTGCAGTTTGTAGACTTACAGGATAATGGGCAAAAATACGTTGAAGCTGTGAATGGAATAATAGATGGGATTAGTGGTAAACTGACAAGGAAAGAGAGTATTAAAAGTGCAGCTTCCACCCAGAATTCTGATTTGAGTGTGATAGAAGCTCTTGATGGCTCGATTGCTGGTCAAGCCGATGTCAGTCAAGTGCCTTCATCTGGCATGCCTGCGGGAAATGGAGCTGCTTCTCAGGATGCTACTTCAAACATGAAGGTTCCTGAAAGCATTGCATCAGTTTACTCAGATGCTTTTGTGATTCCATTGGACACTTCTGCAACTAATTCTGGTCCAATGCACAATCCACCTTTTCATAATGAGGTCGAATTAGAAAAGTCTGTGCCTGTTACTTTATGCCAGGAGGAATTTGGGTTGCAGCATCCTGTTAAGGAAGCTCCACCACCTGCACCTAATTTGCAAGCTTCGGACATTACTGTAACTAACTCTGGTCCAAATCACCGACCACCTTTCCATAATGAGTTGCAGTTTGAAAAGTCTGTGCCTGTTACTTTATCCCAGCAGCATATTGGGTTGCAGCAACCTGGAATGGAAAATCCTCTGCCTGCACTTTATATGCACCCTCTGATTGATCCTTTCCCAGAAGTTATGAACAATGCAGATTTTGTTCAGCTGCCTCGTCAGATGGGGTTCTCAAATCCTGAGCTTTTCAGCAAGGCTGGGTCCATATACTCCCAGCATCAATTACATGAAAATACTCATGGTCTTGTGACCCATCAAGTAGTCCCTGCTGTGCAAATGACAATGGCTCAATCATCTTCTCATGCAGGTGTACAATCAAATGCTATTCAACCACAACTAAGGTCAAGTCCCTTCTGTCATAGTTGGAGGTAG 2142 0.4664 MNLVPILSATSSDGEIDGGAMGLGFSHLFKGELQRWTDDGRSATKGDEQTRETVTVAQDDGGHNDGEIGEAARVLLFGALVLLSFDDPINRFLSLSYHSLTVHRSLSFAAMAFDQTSVPCDLRSLNVTRAAAEEPLVPPASKPLQTAEYFPPNSVWDHVSSGAVPLVYPASVSDAGLVRIAYGNVTSAIASPTWCVRPAVPVHPTVNPAVGLNYGSGFANRFMGANAVDLLGSVVAASHGYPINLGNSVSGNGFDNALPGSSRVVGNAVHQIGGAVVPGGIGFGSSLRTDQGSNEGMNDSVSGQKMKLLCSYGGKILPRPCDGKLRYVGGQTRIISVRRGTSFNELAQKMTDTYGQPVVIKYQLPDEDLDALVSVSCPEDLDNMMEEYEKLIERSPDGSAKLRVFLFSASELDPSGVVQFVDLQDNGQKYVEAVNGIIDGISGKLTRKESIKSAASTQNSDLSVIEALDGSIAGQADVSQVPSSGMPAGNGAASQDATSNMKVPESIASVYSDAFVIPLDTSATNSGPMHNPPFHNEVELEKSVPVTLCQEEFGLQHPVKEAPPPAPNLQASDITVTNSGPNHRPPFHNELQFEKSVPVTLSQQHIGLQQPGMENPLPALYMHPLIDPFPEVMNNADFVQLPRQMGFSNPELFSKAGSIYSQHQLHENTHGLVTHQVVPAVQMTMAQSSSHAGVQSNAIQPQLRSSPFCHSWR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02894 713 SUPERFAMILY CAD & PB1 domains 322 411 - -
Aip03g02894 713 MobiDBLite consensus disorder prediction 478 500 - -
Aip03g02894 713 PANTHER SERINE-THREONINE PROTEIN KINASE 262 470 - -
Aip03g02894 713 Gene3D - 324 409 - -
Aip03g02894 713 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 262 470 - -
Aip03g02894 713 SMART PB1_new 320 409 IPR000270 GO:0005515
Aip03g02894 713 Pfam PB1 domain 322 408 IPR000270 GO:0005515
Aip03g02894 713 CDD PB1_UP2 309 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02894 Aip-Chr3 79679899 79686122 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02894 304 564 MAP Kinase Kinase Kinase AT3G46920 46.992 6.98e-60 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02894 - - ahf:112732322 1183.7