Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02893 ATGTTTGCTCTCTTGTCCTGTTTGAAGCGTCCCCGATGTGTTCAGTCGCGCTGCATCCCACGCGTGCTGGAGGGCCGCCATGTGCCCGGCATCGATGAAATTAGCAACGGCAAGACCACCGCTTTCTCCCTCCCGATCCTCCACCGCCTGTCAGAGCACCCATTCGGTGTGTTCACGTTGGTGGTGACGTCCACTAGGGAACTAGCATTCCAGCTAGCAGAGCAGTTCCGCGCCTTCGGTTCCTGCCTCCACCTCCGCATTGCAGTGGTTGTCAGCGGCATGGACATGCTTCGGCAAACCAAGGAGCTTGCTGCCAGGCCCCACATCGTTATTGCCACGCCGGGGAGGATCAAGGCCTTGCTCGAGAATCCTGATATTCCTCTAGTTTTTGCTTGA 396 0.5758 MFALLSCLKRPRCVQSRCIPRVLEGRHVPGIDEISNGKTTAFSLPILHRLSEHPFGVFTLVVTSTRELAFQLAEQFRAFGSCLHLRIAVVVSGMDMLRQTKELAARPHIVIATPGRIKALLENPDIPLVFA 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02893 131 Gene3D - 3 129 IPR027417 -
Aip03g02893 131 PANTHER RNA HELICASE 8 128 - -
Aip03g02893 131 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 125 IPR027417 -
Aip03g02893 131 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 19 131 IPR014001 -
Aip03g02893 131 Pfam DEAD/DEAH box helicase 14 123 IPR011545 GO:0003676|GO:0005524
Aip03g02893 131 PANTHER ATP-DEPENDENT RNA HELICASE DDX49-RELATED 8 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02893 Aip-Chr3 79679437 79679832 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02893 6 128 Eukaryotic Initiation Factors Gene Family AT5G11200 34.921 3.81e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02893 K14778 - gmx:100798597 198.749