Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip03g02892 | ATGGCTGGAATACTTCCTGGAGTTGAATGTGCTAGAAGGAGAAGACTCCATCAGAGTAAAGGATTCTTGGATTTAACATCTTCTTCCACGGCTTCTTCTACAAGGCGCACTTCTTTTTGTTTGTATGCAGCAAACCATGAGCCCCTTCATTCCTTTTCATCTTCTTCTTTGCTGCATAGAAGCGTGATCTACCATGCGCAACCAGATTTGAGTATGGTTGGAGAAGCCAGAGAAGCCAGACAAAGATTGGATGACAAATTCAGATCACAAAGGAAATCGGAATACAAAAGCATAAAATGTTCGGAAAATAGACAAGCAAGCATAACAGAGTTGCACACAGAGGTATATGGTTCAAAGAAAAGTGGTTCTAGAAGGTTCAATTGGTCCAAATTGAGGTGGAAAGCCTCAGAACAAGAGGATTGTGCTGTGTGCTTGGAGTTATTCAAGGTTGGAGAGACTCTGATGCATCTCCCTTGTGCCCATAAGTTCCATTCCAAATGCTTGAACCCATGGTTTGAAAATAATTCACATTGTCCATGTTGCAGAACTGCCATTATTTAA | 561 | 0.4135 | MAGILPGVECARRRRLHQSKGFLDLTSSSTASSTRRTSFCLYAANHEPLHSFSSSSLLHRSVIYHAQPDLSMVGEAREARQRLDDKFRSQRKSEYKSIKCSENRQASITELHTEVYGSKKSGSRRFNWSKLRWKASEQEDCAVCLELFKVGETLMHLPCAHKFHSKCLNPWFENNSHCPCCRTAII | 186 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip03g02892 | 186 | Pfam | Ring finger domain | 140 | 182 | IPR001841 | - | |
Aip03g02892 | 186 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 186 | IPR013083 | - | |
Aip03g02892 | 186 | CDD | RING-H2_PA-TM-RING | 140 | 182 | - | - | |
Aip03g02892 | 186 | SUPERFAMILY | RING/U-box | 128 | 185 | - | - | |
Aip03g02892 | 186 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 1 | 185 | - | - | |
Aip03g02892 | 186 | SMART | ring_2 | 141 | 181 | IPR001841 | - | |
Aip03g02892 | 186 | ProSiteProfiles | Zinc finger RING-type profile. | 141 | 182 | IPR001841 | - | |
Aip03g02892 | 186 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip03g02892 | Aip-Chr3 | 79424009 | 79426779 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip03g02892 | 1 | 99 | C3H Transcription Factor Family | AT2G15580 | 42.727 | 9.03e-17 | 70.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip03g02892 | - | - | gmx:100527583 | 249.21 |