Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02889 ATGCATCAGTTTGCAGGTTCCTTATTATTTCTCAGTTTAAAGGTGCTGCACAGTTTTTTGCTGTTGGTGTTGGTAAATCCATGGAATGTCACAGAGGTTGCTGCTTCTATTGGTTATGCATTGGATATGCCAGCTGATGAAAGAAAAAAATGGCATTACAGAGCAGAGCAAATTATGATGAAATCGGTAAATTGCAGCATAGCAGAGCTTCCTGGAGAAGATGAAATCGCATCACTGTCGGCGAAGATCCAGGCAAAGGCGAGGAAGCAGGCTAACGGAGGCAGCAACTGGATGGGAAATGGCGAGGAGGCAAGTCGCATATTGGAAAATGGAGTTCTCTCATCGCATCGCTGGGTCCCTCATCCAAATAGTTGCGTCGCCGGAGCACCAACACGGACAGAACCGTGGAAAGAAGACGAACTAAACTAA 429 0.4615 MHQFAGSLLFLSLKVLHSFLLLVLVNPWNVTEVAASIGYALDMPADERKKWHYRAEQIMMKSVNCSIAELPGEDEIASLSAKIQAKARKQANGGSNWMGNGEEASRILENGVLSSHRWVPHPNSCVAGAPTRTEPWKEDELN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02889 142 Gene3D Glycogen Phosphorylase B; 3 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02889 Aip-Chr3 78908203 78908745 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02889 23 52 Trehalose Biosynthesis Gene Families AT1G78580 73.333 1.44e-08 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02889 K16055 - pvy:116146181 59.3066