Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02864 ATGGTAACCATTCGTGCAGATGAAATTAGTAAAATTATCCGCGAACGTATTGAACAATATAATACCGAGGTAAAGATTGCAAATATTGGTACTGTACTTCAAGTAGGTGACGGTATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCGGGGGAGTTAGTGGAATTTGAGGAGGGTACCAGAGGGATTGCTTTAAATTTGGAATCAAATAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGCTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACCAGTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCCTTGGCTAAACCAATTGACGGTCGAGGAGAAATTTCATCTTCCGAATCTCGATTAATCGAATCTCCAGCTCCCGGCATTATTTCGAGACGTTCCGTATATGAGCCTCTTCAAACAGGACTTATTGCTATTGATTCAATGATCCCTATAGGGCGTGGTCAGCGAGAATTAATTATTGGGGACAGACAAACAGGTAAGACAGCAGTAGCTACAGATACGATTCTCAATCAACAAGGACAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCATCCTCTGTGGCTCAAGTGGTGACCACTTTACAAGAAAGGGGAGCAATGGAATACACTATTATAGTAGCTGAAACTGCGGATtcgaagcttaggcatgcccacgttaagggtcacgttagttatactaacgtgaactctaacgtggggaaaaggggcaataagcaacgttgttggaaaaggtga 792 0.351 MVTIRADEISKIIRERIEQYNTEVKIANIGTVLQVGDGIARIYGLDEVMAGELVEFEEGTRGIALNLESNNVGVVLMGDGLMIQEGSSVKATGRIAQIPVSEAYLGRVINALAKPIDGRGEISSSESRLIESPAPGIISRRSVYEPLQTGLIAIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTTLQERGAMEYTIIVAETADSKLRHAHVKGHVSYTNVNSNVGKRGNKQRCWKR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02864 263 Gene3D - 95 240 IPR027417 -
Aip03g02864 263 Gene3D - 3 94 IPR023366 -
Aip03g02864 263 Pfam ATP synthase alpha/beta family, beta-barrel domain 27 93 IPR004100 GO:0046034|GO:1902600
Aip03g02864 263 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 95 IPR036121 GO:0046034|GO:1902600
Aip03g02864 263 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 232 - -
Aip03g02864 263 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 150 233 IPR000194 GO:0005524
Aip03g02864 263 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 236 IPR027417 -
Aip03g02864 263 CDD ATP-synt_F1_alpha_N 28 94 - -
Aip03g02864 263 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02864 Aip-Chr3 73321233 73322024 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02864 87 231 Primary Pumps ATPases(2) AT4G38510 27.329 8.70e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02864 K02111 - gmx:3989298 411.379