Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02861 ATGCCACTTCCTGATATGATGGTTGTTGTGCTGGCTATGGATGAATCAGTATTAGATGTAGATCAGGTGGAAAATCTCATTAAGTTTTGTCCTACCAAAAAAGAGATGGAACTTTTGAAGAGATACACTGGTGACAAAGAGAATTTGGGAAAATGCGAACAGCTGATGAAGGTGCCACGAGTAGAGTCAAAGTTAAGAGTATTCTCTTTCAAGATTCAATTTCTGTCTCAGGTCCGAAAGTCTCTAGGGGTTCTAGCTGATAGGTCGCCTGGACTGCTTGACTTCCACTTAGACCTTGTAAGCCTGGAAGCTGCGACTAAGgataatattgaggatgatgataatgaagattaa 354 0.3842 MPLPDMMVVVLAMDESVLDVDQVENLIKFCPTKKEMELLKRYTGDKENLGKCEQLMKVPRVESKLRVFSFKIQFLSQVRKSLGVLADRSPGLLDFHLDLVSLEAATKDNIEDDDNED 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02861 117 Gene3D Formin, FH2 domain 1 83 IPR042201 -
Aip03g02861 117 Pfam Formin Homology 2 Domain 1 80 IPR015425 -
Aip03g02861 117 PANTHER FORMIN-J 1 82 - -
Aip03g02861 117 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 117 IPR015425 -
Aip03g02861 117 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02861 Aip-Chr3 72937423 72940327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02861 1 85 FH2 protein (formin) Gene Family AT5G07740 75.000 8.11e-40 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02861 - - ahf:112715198 159.073