Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02859 ATGCTTGTGGGTTGGGAAGATGGAGGACTTGACTTCATGGTGTATTGCACCATGAAGGTGCTCTTCTTCTCCGAGGAAGCGGCAGCAAGtgttgctgtgactGGACAACAAGGTTTGCAGCATAAGAGGACTTCGTGGCCGTCGGATCAGGCTCTCAGTCCCTACCGCCATTCAATTGTACGACTTGCAAGAAAGTTGGGACTCTCTCAACCAAGCAAAGTCATCGATTGGCTTCTTGATGCTACAAAACTTGATATCGATAAGCTTCCCCCTCTTCACTTCCCTCAACCCTGCTTCCAACCGTCACAAATCCTATTCCCTCATCTTCTCCATGACCCTTCCTCTTTCTAG 351 0.4729 MLVGWEDGGLDFMVYCTMKVLFFSEEAAASVAVTGQQGLQHKRTSWPSDQALSPYRHSIVRLARKLGLSQPSKVIDWLLDATKLDIDKLPPLHFPQPCFQPSQILFPHLLHDPSSF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02859 116 PANTHER TRANSCRIPTION FACTOR TCP17 63 107 - -
Aip03g02859 116 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 63 107 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02859 Aip-Chr3 72833892 72835966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02859 62 116 TCP Transcription Factor Family AT5G60970 56.364 1.32e-12 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip03g02859 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02859 - - adu:107470915 111.309