Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02850 ATGGGGAGCTTTGATTTGAAGCATTTAATGCTATTGTTTTGGTTTGTGTTGGTTGTGCCTCATTGTTTGTGTGAAGAAGATGATTCTGATGATTCAAGTAGTGCTGTTTACATTGTTTCTCTAAGAAATTCTCCTGCTTCTCATTACTATGGTGAGTTGAGAGAAATGAGTAGTAATGGCTTCCAAGTAAAAAGTGGTGGTGGTGGTGGTGGTGCTTCTTCTGGAAGAATTCAGTTTCACAAACCAAGATATGGCAATGCTACAAAGACAAATAAGAGATATGGCTCTTACGTTGCTCAAGTTCATGATTCTTTGTTGAAGAAAGTGTTAAAAGGAGAGAAATATCTAAAGGTCTATAGCTACCACTATCTGATAGATGGATTTGCTGTGCTGGTTACTCAACAACAGGCAGAGAAATTGGCTCGGAGTAGTGAAGTGTCGAATGTGGTTTTGGACTTTTCTGTAAGAACTGCAACTACTCATACGCCACAGTTTTTGGGTCTGCCGCAAGGAGCATGGTCTCAAGAAGGTGGGTTTGAAGGAGCCGGAGAAGGAGTGGTTATTGGTTTTGTTGATACCGGCATAGATCCAACACACCCGAGTTTCGCTGATAACAAATCTGAACATGCTTATCCTGTTCCTGCTCATTTTAATGGCATCTGTGAGGTCACACGAGATTTTCCATCCGGATCTTGCAATAGGAAGCTTGTTGGAGCCCGGCATTTCGCTGCGTCTGCTATAACCAGAGGAATATTTAATTCAACACAGGACTATGCTTCTCCATTCGACGGAGATGGCCATGGCACGCATACAGCAGCTGTTGCAGCAGGGAACCATGGGATTCCGGTGATTGTTGCTGGGCATCACTTTGGGAATGCTAGCGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCATTGTACAAGAGCTTTGGAGGATTCGCTGCAGATGTTGTGGCAGCTATAGACCAGAAATACAATAGAACAGTAAAAGATAATAGAGGAATTTCGAGAGTCCTCGGTATAACATATTTTCTAAGATAA 1047 0.4279 MGSFDLKHLMLLFWFVLVVPHCLCEEDDSDDSSSAVYIVSLRNSPASHYYGELREMSSNGFQVKSGGGGGGASSGRIQFHKPRYGNATKTNKRYGSYVAQVHDSLLKKVLKGEKYLKVYSYHYLIDGFAVLVTQQQAEKLARSSEVSNVVLDFSVRTATTHTPQFLGLPQGAWSQEGGFEGAGEGVVIGFVDTGIDPTHPSFADNKSEHAYPVPAHFNGICEVTRDFPSGSCNRKLVGARHFAASAITRGIFNSTQDYASPFDGDGHGTHTAAVAAGNHGIPVIVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAIDQKYNRTVKDNRGISRVLGITYFLR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02850 348 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 188 199 IPR023827 -
Aip03g02850 348 Pfam Subtilase family 183 331 IPR000209 GO:0006508|GO:0008236
Aip03g02850 348 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 156 IPR037045 -
Aip03g02850 348 SUPERFAMILY Subtilisin-like 107 325 IPR036852 GO:0004252|GO:0006508
Aip03g02850 348 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 22 327 - -
Aip03g02850 348 Gene3D Peptidase S8/S53 domain 185 325 IPR036852 GO:0004252|GO:0006508
Aip03g02850 348 Pfam Peptidase inhibitor I9 36 158 IPR010259 -
Aip03g02850 348 PRINTS Subtilisin serine protease family (S8) signature 183 202 IPR015500 -
Aip03g02850 348 PRINTS Subtilisin serine protease family (S8) signature 263 276 IPR015500 -
Aip03g02850 348 ProSiteProfiles Serine proteases, subtilase domain profile. 163 348 - -
Aip03g02850 348 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 327 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02850 Aip-Chr3 70436914 70440095 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02850 9 325 Subtilisin-like Serine Gene Family AT5G44530 62.069 1.25e-135 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02850 - - gmx:100820468 488.804