Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02828 ATGAGGGATACTGTTTGCATAGCTCTTGCTGATGACACCTGTGAAGAGCCCAAGATCAGGATGAACAAAGTTGTGAGGTCGAATTTGCGGGTTCGTCTTGGAGATGTTGTGTCCGTGCACCAGTGCCCTGATGTGAAGTATGGGAAACGTGTGCACATTCTGCCTATTGATGATACCATTGAAGGTGTCACTGGCAATCTGTTTGATGCTTTCTTGAAATCTTATCGTCCTATAAGAAAAGGAGATCTATTTCTTGTCTGTGGAGGGATGAGAAGTGTGGAGTTTAAGGTCATTGAAACTGATCCTGGGGAGTACTGTGTGGTTGCTCCAGATACTGAAATCTTCTGTGAGGGGGAGTCTTTGAAAAGAGAGGATGAAGAGATGCTGGATAAAGTTGGATATGATGATGTGGGTGGAGTCAGGAAACAAATGGCACAAATTTGTGAGTTGGTAGAGCTTCCCTTGAGGCATCCACAACTCTTTAAGTCGATTGGTGTGAAACCACCCAAAGGTATTCTACTTTATGGACCCCCTGGTTCCGGGAAGACACTGATAGCAAGAGCTGTTACTAATGAAACGGGAGCTTTCTTCTTTTGTATAAATGGACCGGAGATTATGTCCAAACTGGCAGGAGAGAGTGAAAGCAATTTGAGGAAAGCATTTGAAGAGGCTGAAAAGAATGCACCATCCATCATCTTAATTGATGAAATTGATTCTATTGCACCCAAGAGGGAGAAGACACATGGTGAAGTTGAAAGGAGGATTGTTTCACAGCTTTTGACTCTTATGGATGGATTGAAATCTCATGCTCATGTTATCGTTATTGGAGCTACCAATCGCCCAAACAGCATTGACCTAGCATTGAGAAGGTTCGGTAGATTTGATAGGGAAATTGATATTGGTGTTCTTGATGAAGTTGGCCGACTTGAAGTTCTTCGTATACACACTAAAAACATGAAGCTCTCTGATGATGTAAGTTTCATTGTCTCTTAA 993 0.425 MRDTVCIALADDTCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDAFLKSYRPIRKGDLFLVCGGMRSVEFKVIETDPGEYCVVAPDTEIFCEGESLKREDEEMLDKVGYDDVGGVRKQMAQICELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAVTNETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIILIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSHAHVIVIGATNRPNSIDLALRRFGRFDREIDIGVLDEVGRLEVLRIHTKNMKLSDDVSFIVS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02828 330 Gene3D - 1 44 - -
Aip03g02828 330 Pfam Cell division protein 48 (CDC48), domain 2 70 119 IPR004201 -
Aip03g02828 330 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG E 2 326 - -
Aip03g02828 330 SMART AAA_5 168 304 IPR003593 -
Aip03g02828 330 SUPERFAMILY Cdc48 domain 2-like 44 130 IPR029067 -
Aip03g02828 330 Gene3D - 135 303 IPR027417 -
Aip03g02828 330 ProSitePatterns AAA-protein family signature. 272 290 IPR003960 GO:0005524|GO:0016887
Aip03g02828 330 Gene3D - 304 321 - -
Aip03g02828 330 PANTHER AAA-FAMILY ATPASE 2 326 - -
Aip03g02828 330 Pfam ATPase family associated with various cellular activities (AAA) 172 301 IPR003959 GO:0005524|GO:0016887
Aip03g02828 330 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 325 IPR027417 -
Aip03g02828 330 SMART CDC48_2_2 62 123 IPR004201 -
Aip03g02828 330 Gene3D - 45 134 - -
Aip03g02828 330 SUPERFAMILY ADC-like 2 42 IPR009010 -
Aip03g02828 330 CDD AAA 167 301 - -
Aip03g02828 330 Pfam Cell division protein 48 (CDC48), N-terminal domain 2 43 IPR003338 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02828 Aip-Chr3 66781447 66783211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02828 131 325 Calmodulin-binding Proteins AT3G56690 48.223 1.62e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02828 K13525 - aip:107633205 646.736