Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02826 ATGGGCCGTGCAAAAACAGAATTGAAGTGCCTCTCAACTGAGAAAGATCGGAAAGGCAGATTCAAGACAAGAATCAAGGGACTAGAGAGCAAAATGAAGAAATTTTCTGACAAATGCGAAGGATCCGAAGCATGCTTGACAGTTTATGAAGAAGGTAGCAACGATGCACCAATGATTTGGCCAAAAGATTCCACAAAAATCAGATCCTTAATTAAAAAGTACGAAGCTCAAAAGAATGTGAGGCCTCTTAAGATCTTTGATCTCCAAGACTTCTTTGAGCACAAGAAGACCTTGGTTGAAGCCGAAACTTTGAAAGCGCAAAAATGCATCTACAGCGTCAAGTATCCCACTTCTGACTTGAATATCCGGAGCTTAGATTTGGAACAACTGAGGATGTTCATTGGCATATTGGATAACAAAATTGGTGCGTTGGCTGAAAGGATTAACATGCTGAAAAATAGTCAAAAAGTTGAAAGTAACTTCAATTTTGGACAGAGTATTGATCGGTACAACTCTCAGATTCAACCTATGATGCCACATAGTTATGATATGGGTTCTAGTTCCCAAATGGGTCTCCTTAGTCCAAATCCAATGGAATTGATGGGAAGTATGGTGAATGCTATGATGTCTAAAAGGTGGTGCCCATTTACTAAAAAGGGTTAA 663 0.3937 MGRAKTELKCLSTEKDRKGRFKTRIKGLESKMKKFSDKCEGSEACLTVYEEGSNDAPMIWPKDSTKIRSLIKKYEAQKNVRPLKIFDLQDFFEHKKTLVEAETLKAQKCIYSVKYPTSDLNIRSLDLEQLRMFIGILDNKIGALAERINMLKNSQKVESNFNFGQSIDRYNSQIQPMMPHSYDMGSSSQMGLLSPNPMELMGSMVNAMMSKRWCPFTKKG 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02826 220 PANTHER MADS BOX PROTEIN 3 195 - -
Aip03g02826 220 PANTHER PROTEIN, PUTATIVE-RELATED 3 195 - -
Aip03g02826 220 ProSiteProfiles MADS-box domain profile. 1 52 IPR002100 GO:0003677|GO:0046983
Aip03g02826 220 SUPERFAMILY SRF-like 2 81 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02826 Aip-Chr3 66566890 66567552 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02826 1 147 Type I MADS-box Gene Family AT5G55690 29.870 3.87e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02826 - - aip:107633206 444.891