Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02816 ATGGAGAGAGAGGATGAAGATGCGACGCAAGAGAGGAGGCTATTCCGCCGTGCACTGTCATCGCTCCTGCGGTCGATTGAAGCCACCGCCGCATCTAGGGCTTGCCGTGCTGCTGCAACAATATATTTTAGAAGTTGTATTGGACTGGAAGAGAGGGAAGGGGAGCGGAACAATGCTGATCGATTCCTGAATTGGAGCACTAGGTTCCAAATTGTTCTAGGCGTGGCAAGGGGATTGGAGTACCTTCATGAGGATTCAAATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATAATAAGTTTCATCCCAAGATTGGAGACTTTGGCCTTGCCAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACACAATTTGCTGGAACATTTCTCAAACATGAGTACGCAACACATATCATAGGGGAGTGGTGTGAGCTTCTGAATGAATCTGCGCCAAAAGGGCTGTTTTCGCCGGAGCCAGAACATTATCGAGGACCAAAGCTAAAAGTTGCCATCATTAGAGCTGGGCTTTCTGGCATGTCAACTATAGTGGAACTCTTGGATCAAGGACACGAGGTGGATATATATGAGTTGAGGACTTTTATTGGTGGGAAAGTTTGTTCTGTTGTTGATAAGAAAGAAAACCAAATTGAAATGGGATTTCTTACAAATAGAAATGGGGCTGGTGATGATTTGTTTAAAGAGCTATGGAGGCTGTGTGTAGGGCCATTAATGGATGTTCCTTGTGTTCAAGACAGAGTTTTCTATTTCCCTCAGGGTCACATTGAATTGTTGCCAGAACCTACAGAACAAGATTTGAGGCAGATGAAGAACCAGAAATCTCCCAAATACGATCTTCCGTCGAAGATCTTATGTCGTGTTATCGATGTTAAGTGTCTGAATACTGGAACTAATTTGCTTCAATGGCCAGTGGAAGAAATAGAGAGCTTGAGACTTAGTAGTGATGAATTTAAGGAATTATTGGTTAGACCTGGCACAGTAGTGCCATTACACATTGGCCCTGCAACACAGGATTTTTCCATAGTTATTGGTTGCATTGTTACAACTTGTATCTCACAGTAA 1095 0.432 MEREDEDATQERRLFRRALSSLLRSIEATAASRACRAAATIYFRSCIGLEEREGERNNADRFLNWSTRFQIVLGVARGLEYLHEDSNLRIIHRDIKASNILLDNKFHPKIGDFGLARFFPEDQAYLSTQFAGTFLKHEYATHIIGEWCELLNESAPKGLFSPEPEHYRGPKLKVAIIRAGLSGMSTIVELLDQGHEVDIYELRTFIGGKVCSVVDKKENQIEMGFLTNRNGAGDDLFKELWRLCVGPLMDVPCVQDRVFYFPQGHIELLPEPTEQDLRQMKNQKSPKYDLPSKILCRVIDVKCLNTGTNLLQWPVEEIESLRLSSDEFKELLVRPGTVVPLHIGPATQDFSIVIGCIVTTCISQ 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02816 364 Gene3D Transferase(Phosphotransferase) domain 1 52 140 - -
Aip03g02816 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 90 102 IPR008271 GO:0004672|GO:0006468
Aip03g02816 364 Pfam Protein kinase domain 70 133 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02816 364 ProSiteProfiles Protein kinase domain profile. 1 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02816 364 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 59 140 - -
Aip03g02816 364 SUPERFAMILY FAD/NAD(P)-binding domain 171 272 IPR036188 -
Aip03g02816 364 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 59 140 - -
Aip03g02816 364 SMART tyrkin_6 1 191 IPR020635 GO:0004713|GO:0006468
Aip03g02816 364 Gene3D - 169 244 IPR036188 -
Aip03g02816 364 Pfam Flavin containing amine oxidoreductase 181 280 IPR002937 GO:0016491
Aip03g02816 364 SUPERFAMILY Protein kinase-like (PK-like) 61 134 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02816 Aip-Chr3 65613902 65617009 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02816 63 134 Receptor kinase-like Gene Family AT1G70530 66.667 3.04e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip03g02816 Amino_oxidase 1.6e-06 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02816 - - aip:107647562 195.667