Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02802 atgcaagCTTCCTCTCCTTGTCCTCCTCTGTGTCTTCTCCACCAAAATCGTCAACGCCTTCCTCTTCGACAATCCAGATCTGCCGCTAGGGATTCCATTCCGCAGGAGAGGAATTCCTTTGTCAACTTCCAAGCCAAAACCGGTGTAGAGGAGATTGCTTTCTTCGATGTTACTCGAACAGGAGAAATCTTAAGTAGGTTGTCGGAAGATACACAGATCATAAAGAATGTCGCAACTACCAATGTTTCTGAGGCCATGAAGGACCTAGCAATAACACTTATGGGTCTCAGCTTCATGTTTGCAACATCTTGGAAGTTAACATTGTTGGCTTTGGCTGTTGTGCCTGTAATTGCTGTCTGTAAATTTGGGCATTTCCTGCGTGAACTATCTCACAAAACTCAAACTGCAGCTGCAGTAGCATCTTCAATTGCTGAGGTAGAAGGTCATGAGAGGTGA 456 0.443 MQASSPCPPLCLLHQNRQRLPLRQSRSAARDSIPQERNSFVNFQAKTGVEEIAFFDVTRTGEILSRLSEDTQIIKNVATTNVSEAMKDLAITLMGLSFMFATSWKLTLLALAVVPVIAVCKFGHFLRELSHKTQTAAAVASSIAEVEGHER 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02802 151 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 50 145 IPR039421 -
Aip03g02802 151 SUPERFAMILY ABC transporter transmembrane region 52 144 IPR036640 GO:0005524|GO:0016021
Aip03g02802 151 PANTHER ABC TRANSPORTER B FAMILY MEMBER 25 50 145 - -
Aip03g02802 151 Pfam ABC transporter transmembrane region 51 145 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip03g02802 151 Gene3D ABC transporter type 1, transmembrane domain 47 146 IPR036640 GO:0005524|GO:0016021
Aip03g02802 151 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 51 145 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02802 Aip-Chr3 61962143 61966303 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02802 50 145 Calmodulin-binding Proteins AT2G36910 30.303 5.18e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02802 - - aip:107621923 150.599