Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02796 ATGGATTTGCTGGAGTGTTTCCTAGAtgttagggacttgggtattatgggtgctcaaagtcccacatcgagtaGACAAGTTTGGTGTAAGGTCTCTGAGACACAGCCCTGCAGAAATGATGGCAGCCCTTTACCTACAActcacccaaacaaGCCCTGCATTCACCACAAAGAAAGACTATGGCAAAGAAGAGAGATAGAGGCACAATGGGCTGTTGCACAGAGAAATCTTCATGGTCTTCAGCCACCAGAAACAACCAATCTTTTCAATGACAAGTATAGCTACAGGGAACTTTCAGAGATTGCTGAGCAAGCAAAAAGACGTGCTGAGGTTGCAAGCAAGGCATCTGAAGCGGTTGAGCATCATTACGTGAATGCAAGACTCACCCTTATTCAAACTGCTGCCGCTAAAGGAGCAGGCAACATATGA 429 0.3939 MDLLECFLDVRDLGIMGAQSPTSSRQVWCKVSETQPCRNDGSPLPTTHPNKPCIHHKERLWQRREIEAQWAVAQRNLHGLQPPETTNLFNDKYSYRELSEIAEQAKRRAEVASKASEAVEHHYVNARLTLIQTAAAKGAGNI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02796 142 Coils Coil 95 115 - -
Aip03g02796 142 PANTHER CALCIUM-TRANSPORTING ATPASE 61 124 - -
Aip03g02796 142 Gene3D - 93 123 - -
Aip03g02796 142 PANTHER PLASMA MEMBRANE ATPASE 61 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02796 Aip-Chr3 61178203 61180622 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02796 61 116 Primary Pumps ATPases AT1G80660 67.857 1.34e-20 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02796 K01535 - pda:103707081 83.1889