Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02790 ATGGAGTCAGAGACTGGTGATGATGTTCCCATTGTTGGGATGGAATTTGAATCTCTGGATGCAATAATCGAATTCTACGACACCTACCCAAGAAGAGTTGGTTTTGACTGGAGGAATAGGAATTCGAAAAAGAATGCCGATAAGGTTGTATACCATGTTATGCTTGTCTGCAACCGGGAGGGCAAAGCCGAATCAAAGGTTGATGAAACGAGGAAGACCTATCCAAAAGGACCTACAGGGTGTAAAGCTAGGATGATTGCCTCTTCTGATGTCGGCGGTAGTTGGATTGTTAGGGTAGTTAAACTCGAACACTGTCACGATCTGAATTGCACTAATTCTAGCATATTGAGGAGAAATAAGAGTATTGCCTTGTACGAGTACTTTGGGAATGTTGTTAGCTTTGATACGACATACCTAACAAACAAGTACGACAAGCTGTTTGCTGCCTTTATCAGAGATAACCATCACGGGCAATCTATACTTCTTGAGTGA 492 0.4228 MESETGDDVPIVGMEFESLDAIIEFYDTYPRRVGFDWRNRNSKKNADKVVYHVMLVCNREGKAESKVDETRKTYPKGPTGCKARMIASSDVGGSWIVRVVKLEHCHDLNCTNSSILRRNKSIALYEYFGNVVSFDTTYLTNKYDKLFAAFIRDNHHGQSILLE 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02790 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 7 120 - -
Aip03g02790 163 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 120 - -
Aip03g02790 163 Pfam FAR1 DNA-binding domain 24 109 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02790 Aip-Chr3 60369630 60370418 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02790 FAR1 4.1e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02790 - K17604 aip:107640510 211.075