Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02776 ATGTTGATCATCGCTGTTGCTGCACTGACCATCGCTCTTCTTCACCATTCTTCTCATCATCGTCTTCTCTGTGCTCACATCGTTGAGTATCTAGGTCTCAGCTTGGACAAAGGGAAAGGAGCCGATAGAGCAGCAGCACCAGGAGTAGGCTTCTTGAAGCCACCAAAAGAGGCCTCCGGTAGCGGCAAGCACTTTCGCGATGATGTCCTTGATGCCAGAGCTAAGAATGTTTTTCATGGCCAACCAATGCCTACTACTATTCCGGCAGCTCCACATCCTCTAACAATGCGTCCTAGGGTGCGGGCTAGAAGAGGACAGGCTACAGACCCACACAGTATAGCTGAACGGTTGCGCAAAGAAAGAATAGCAGAAAGAATCAGGGCTCTACAAGAACTAGTTTCAAGTGTCAACAAGGTATCGTTCATTCACTACTTCTTTAGCTCATCAGATCTCCACTAA 459 0.4815 MLIIAVAALTIALLHHSSHHRLLCAHIVEYLGLSLDKGKGADRAAAPGVGFLKPPKEASGSGKHFRDDVLDARAKNVFHGQPMPTTIPAAPHPLTMRPRVRARRGQATDPHSIAERLRKERIAERIRALQELVSSVNKVSFIHYFFSSSDLH 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02776 152 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 28 139 - -
Aip03g02776 152 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 104 138 IPR036638 GO:0046983
Aip03g02776 152 Gene3D - 99 145 IPR036638 GO:0046983
Aip03g02776 152 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 106 152 IPR011598 GO:0046983
Aip03g02776 152 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 28 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02776 Aip-Chr3 56882006 56884141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02776 31 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 66.372 8.47e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02776 - - ahf:114924986 240.736