Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02768 ATGTTTGATCGTGTGAATATTTTGTGGCCTTCTTTTCAGGAAATATATCTTCTGAGTCAATTTGAACATGAGAACATAGTTAGATATCTTGGCACAGACAAGGACAATAACATGCTATACATCTTTCTCGAGCTTGTAACAAAAGTATCATTGGCAAGTCTTTATAGAAAGTATCATTTAAAGGATTCTCAGGTTTCGGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAACGTGATTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGTGAAGCTTGCATACATAAGAGAAATCACCCACGGGCCACGATCGAGCAGCCCCTCTTCGCCACCGCATCCCACCGCCATTGCCACCGCATCCTACGGCCACAGCAGCGACGGCGTTGACCACGGCAACCACCATGGCATCCCTTCTCCCTTCTCCCTTCTCCCTCACTCTCATCAGTCTCACTCACCCAAATCCCTAACCCACTACGGTGCTACTTCCCTCTCTCTCTCAGCCAGCAGCAGTCACCGCCTCTTCGTCTCTCTCTCAGCCAACAACAGCAGTCTCCGGCGACCCATCGTCCGACAAGCTGACCACCATTCTTACCTTCCCTCTTCTCTTCTCGCCTCTCCTCTTCCCTTCGAACACTTCTGCCCCCCACTCATTTCTCTTCCCTCTTCTCTTCTCGCCTCTCCTCTCCTCTTCTCTTCTCGCCTCCTCTTTTGTCGCCGTTACTCACTGCCGGAAATATATCTTCTGAGTCAATTTGAACATGAGAACATAGTTAGATATCTTGGCACAGACAAGGACAATAACATGCTATACATCTTTCTCGAGCTTGTAACAAAAGTATCATTGGCAAGTCTTTATAGAAAGTATCATTTAAAGGATTCTCAGGTTTCGGCATACACAAGACAGATTCTAAGTGGTTTGAAGTATCTCCATGATCGTAACGTGATTCACAGGGACATCAAGTGTGCTAATATATTGGTTGATGCAAATGGATCCGTGAAGCTTGCATACATGTAA 1050 0.4552 MFDRVNILWPSFQEIYLLSQFEHENIVRYLGTDKDNNMLYIFLELVTKVSLASLYRKYHLKDSQVSAYTRQILSGLKYLHDRNVIHRDIKCANILVDANGSVKLAYIREITHGPRSSSPSSPPHPTAIATASYGHSSDGVDHGNHHGIPSPFSLLPHSHQSHSPKSLTHYGATSLSLSASSSHRLFVSLSANNSSLRRPIVRQADHHSYLPSSLLASPLPFEHFCPPLISLPSSLLASPLLFSSRLLFCRRYSLPEIYLLSQFEHENIVRYLGTDKDNNMLYIFLELVTKVSLASLYRKYHLKDSQVSAYTRQILSGLKYLHDRNVIHRDIKCANILVDANGSVKLAYM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02768 349 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 13 106 - -
Aip03g02768 349 ProSiteProfiles Protein kinase domain profile. 187 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02768 349 Gene3D Transferase(Phosphotransferase) domain 1 247 347 - -
Aip03g02768 349 Gene3D Transferase(Phosphotransferase) domain 1 5 107 - -
Aip03g02768 349 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 256 347 - -
Aip03g02768 349 SUPERFAMILY Protein kinase-like (PK-like) 12 105 IPR011009 -
Aip03g02768 349 MobiDBLite consensus disorder prediction 112 142 - -
Aip03g02768 349 MobiDBLite consensus disorder prediction 113 133 - -
Aip03g02768 349 SMART serkin_6 2 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02768 349 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 256 347 - -
Aip03g02768 349 Pfam Protein kinase domain 12 105 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02768 349 Pfam Protein kinase domain 254 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02768 349 ProSiteProfiles Protein kinase domain profile. 1 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02768 349 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 106 - -
Aip03g02768 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Aip03g02768 349 SUPERFAMILY Protein kinase-like (PK-like) 250 347 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02768 Aip-Chr3 56322816 56331929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02768 256 347 MAP Kinase Kinase Kinase AT4G08500 73.913 6.20e-38 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip03g02768 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02768 - K13414 gmx:100806902 164.851