Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02734 ATGGCTACAAAGAACAAGATGCTACCGGAGCTTGTAACTTTCCGCCCTGATTTGGTTCACATGGAAGAACTCTGTTGCTCATCCCCAACTCAAACAGAGCTCATCATCGGCGCTTGCACTCTCTCCTCTGCCGGCGCTCCCTCCGTCGTCTCCCCTAACCTGTCTCTGCTGGCGCTCGCATTCCCTGCGCTCACTACTCACGGTGTCGGTCAGCCAACGGAGGTCGCCTTTCCTTCCTCCGTACCGCTATTCTCTGCCTCCTCCCTCGTCATCTTGCTCAATCTTCAACCACCTTCGAAGTCCTCATCACTGCATGCATATGGCGTTGTCATACAGCTACATTGCAATGGCGAAATCCTAACACCAAGAGGATGGGGAACTAACGAGGATTTGATCATATCGATCTTGGGTCATCGAAATGCTGCTCAGAGGAAGCTGATTCGAAAAACTTATTTTGAGACTTATGGAGAAGATCTCCTCAAGGCCTTGGACAAGGAGCTTAGCAATGACTTCGAGAGGTTGGTACTTCTTTGGACACTTGATCCTGCTGAGCGAGATGCGTTTTTGGCGAACGAAGCAACCAAAAGATGGGCTTCAAGCAATCAGGTTTTGATGGAAATAGCTTGTACCAGGTCCTCTGACCAATTGCTTTTCGCAAGGAAGGCTTATCATGCTCGTTATAAAAAGTTTCTCGAGGAGGATGTTGCTCATCACACAACTGGGGAGTTCCGTAAGGTACTGCTTCTAGTTCTAGATCATAATTATGAGGAAGCTGTGAAACACTTTGATCCTGCTCTTAGAGTTCCTCACAGCCATACCAAGCTTTATGTACGATCTAAGGAAAGGAAGTTTGAGagggctagaggaaggaggaacaacaaagaacttagggtttaa 897 0.4582 MATKNKMLPELVTFRPDLVHMEELCCSSPTQTELIIGACTLSSAGAPSVVSPNLSLLALAFPALTTHGVGQPTEVAFPSSVPLFSASSLVILLNLQPPSKSSSLHAYGVVIQLHCNGEILTPRGWGTNEDLIISILGHRNAAQRKLIRKTYFETYGEDLLKALDKELSNDFERLVLLWTLDPAERDAFLANEATKRWASSNQVLMEIACTRSSDQLLFARKAYHARYKKFLEEDVAHHTTGEFRKVLLLVLDHNYEEAVKHFDPALRVPHSHTKLYVRSKERKFERARGRRNNKELRV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02734 298 PANTHER ANNEXIN D2 123 256 - -
Aip03g02734 298 Pfam Ribosomal protein 60S L18 and 50S L18e 245 297 IPR021131 -
Aip03g02734 298 Gene3D Annexin 104 180 IPR037104 GO:0005509|GO:0005544
Aip03g02734 298 PRINTS Annexin family signature 163 179 IPR001464 GO:0005509|GO:0005544
Aip03g02734 298 PRINTS Annexin family signature 190 211 IPR001464 GO:0005509|GO:0005544
Aip03g02734 298 PRINTS Annexin family signature 123 145 IPR001464 GO:0005509|GO:0005544
Aip03g02734 298 Pfam Annexin 186 249 IPR018502 GO:0005509|GO:0005544
Aip03g02734 298 Pfam Annexin 124 177 IPR018502 GO:0005509|GO:0005544
Aip03g02734 298 ProSiteProfiles Annexin repeat profile. 181 252 IPR018502 GO:0005509|GO:0005544
Aip03g02734 298 Gene3D Annexin 181 251 IPR037104 GO:0005509|GO:0005544
Aip03g02734 298 ProSiteProfiles Annexin repeat profile. 104 180 IPR018502 GO:0005509|GO:0005544
Aip03g02734 298 SUPERFAMILY Annexin 123 265 IPR037104 GO:0005509|GO:0005544
Aip03g02734 298 PANTHER ANNEXIN 123 256 - -
Aip03g02734 298 SMART annex3 126 178 IPR018502 GO:0005509|GO:0005544
Aip03g02734 298 SMART annex3 198 250 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02734 Aip-Chr3 53744126 53748187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02734 247 298 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 57.692 3.94e-13 63.9