Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02730 ATGGCTTCCACCTCTCATAAACTCACCTTCCTCTTTTCTCTCACACTCTTTTTATTCTTCTCCTCATCACATGCTTATGCTGCTGTTAACTCTTCAAATTCCTCAACACTATTTCACACCAACCTTTCTTCCTTAAGATCTTTCTGCAAAACCACCCCTTACCCAGAAACATGCTTCGAATCACTGAAGCTTTCAATCTCAATAAACATAAGTCCAAACATCATTACCTACCTCCTTCACTCCCTACAAGTCGCAATTTCGGAAGCCACAAAGCTATCAACACTTTTCCAAAGCGTTGGTGCCTCAAACTCAAACATCAGAGAGAAACAAAAGGGTTCAATCCAAGACTGCAAGGAGCTTCACCAATCAACTTTAACATCTCTAAAGAGATCACTCTCCGGGGTTCGTAACTCCCAGAACTCAAGAAAATTGCGTGATGCTAGAACCTTCCTCAGTGCAGCACTCACAAACAAGAACACTTGTCTAGAAGGCCTAGACTCTGCTTCCGGAACCATGAAACAAAAACTGGTAAACTCCGTTATTAACACTTACAAGCACGTGAGTAATTCCCTCTCAATGCTTTCTAATCCAGGAAATGACGACAACGATGGCGGATTCATGAAGAAAAGCTTGGAAGATGGGGAGCAGTATGATCCAAACGAGGTGATTGTTGTGGCGAAAGATGGAACAGGGAACTTCAGCACTGTTTCTGATGCAATAAACTTTGCTCCCAATAACAGCTATGTGAGGACGGTAATCTATGTGAAAGAAGGGGTTTATGAGGAAAATGTTGAGATCCCAAGTTGTAAGCCTAACATTGTTCTTGTTGGAGATGGAAGTGACGTCACTCTCATTACTGGTAGCAGAAGTGGTGGTGATGGATGGACCACTTTCAGATCTGCAACTCTAGCTGTATCTGGTGATGGCTTTCTAGCACGTGACATAGCTTTTGAGAACAGTGCAGGTCCTGAGAAGCGTCAAGCAGTTGCACTAAGAGTAAACGCAGATTTAACCGCTTTCTACCGGTGTTCCATTTATGGTTACCAAGACACGCTCTATGTTCACTCCTTCAGACAATTCTACAGAGAATGCGACATTTACGGAACCATAGATTTCATATTCGGTAACGCCGCCGTAGTCCTACAAGAATGTAACATTGTTTCAAGAAAGCCATTGCCTGGCCAATTCACTGTGATAACGGCACAATCAAGAGATACGCCAGACGAGGACACCGGAATCTCGATCCAAAACTGCTCAATTATAGCCACAACTGATTTGTATGCAGCTTCAAACTCTAGCACTACCATTAAGAGCTACCTTGGTAGGCCATGGAGGGTTTATTCAAGAGTTGTTTATCTCGAGTCATACATTGATGACTTCATTGACCCAAAGGGTTGGTCAAAATGGTCTAATAGTGATGATGATCAAGGCTTGGATACTTTGTATTATGGAGAGTTTGAGAATTATGGACCTGGTTCAAGAACAAATGGACGTGTAAATTGGGTTGGCTACCATGTGATGAATTACAATGATGCCTATAACTTCACGGTTTCAGAGTTCATCACTGGTGATGCTTGGCTTGGGTCTACTTCTTTTCCTTATGATGATGGTATTTAA 1617 0.4242 MASTSHKLTFLFSLTLFLFFSSSHAYAAVNSSNSSTLFHTNLSSLRSFCKTTPYPETCFESLKLSISINISPNIITYLLHSLQVAISEATKLSTLFQSVGASNSNIREKQKGSIQDCKELHQSTLTSLKRSLSGVRNSQNSRKLRDARTFLSAALTNKNTCLEGLDSASGTMKQKLVNSVINTYKHVSNSLSMLSNPGNDDNDGGFMKKSLEDGEQYDPNEVIVVAKDGTGNFSTVSDAINFAPNNSYVRTVIYVKEGVYEENVEIPSCKPNIVLVGDGSDVTLITGSRSGGDGWTTFRSATLAVSGDGFLARDIAFENSAGPEKRQAVALRVNADLTAFYRCSIYGYQDTLYVHSFRQFYRECDIYGTIDFIFGNAAVVLQECNIVSRKPLPGQFTVITAQSRDTPDEDTGISIQNCSIIATTDLYAASNSSTTIKSYLGRPWRVYSRVVYLESYIDDFIDPKGWSKWSNSDDDQGLDTLYYGEFENYGPGSRTNGRVNWVGYHVMNYNDAYNFTVSEFITGDAWLGSTSFPYDDGI 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02730 538 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 194 IPR006501 GO:0004857
Aip03g02730 538 CDD PMEI-like_3 47 197 - -
Aip03g02730 538 PANTHER PECTINESTERASE 14 537 - -
Aip03g02730 538 Pfam Plant invertase/pectin methylesterase inhibitor 44 193 IPR006501 GO:0004857
Aip03g02730 538 SUPERFAMILY Pectin lyase-like 220 535 IPR011050 -
Aip03g02730 538 SMART PMEI_2 40 193 IPR006501 GO:0004857
Aip03g02730 538 PANTHER PECTINESTERASE 14 537 - -
Aip03g02730 538 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Aip03g02730 538 Gene3D - 218 538 IPR012334 -
Aip03g02730 538 ProSitePatterns Pectinesterase signature 2. 366 375 IPR033131 -
Aip03g02730 538 Pfam Pectinesterase 223 524 IPR000070 GO:0030599|GO:0042545
Aip03g02730 538 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 196 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02730 Aip-Chr3 53582306 53586343 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02730 43 538 Carbohydrate Esterase AT2G26440 65.769 0.0 681
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02730 - - aip:107630581 1047.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02730 03 53582306 53586343 Aip03g02730 03 53582306 53586343 ECH