Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02729 ATGGCATTCCAAGATTTCGATATCATAAACGAACGGAGACGACAGGAGAGGAGAAAAAAGATCCAGAAGAGAATCCTCATCGGTCTAGTATCCACCATTCTTCTTGTATGCATCATAGGCGCTGCGGCCTACGTTGGACTCAATTCCAAGTCCTCCGGTGGAGGTGGGAGTGACCACGGCAAGTCACCGTCCAAGCCGAGTCATCAGCCTACCACCACCTCTGCTTCCGCCTCGGCCTCCACCAATACCAAAGCATTGGAAGCTTCATCAAAGATTGTGAAAGTAATATGCGAAGCTGCAGAATATAAGGACAAATGCGAAAGCTCCCTTGGCGATGCTGTTAAGAATGACCCCAATGCACAACCAAAAGATCTGCTTAAATACTCCATCAAACTAGCTCAGGACGAGGTTGGAAAGGCCTTCGACAAAACCACCTCCATGAAATTTGAATCCGAAATGGACAAAGGAGCGTATGAAGATTGCAAGCAGCTTTTTGACGACGCCAAGGAAGAACTCGGCTTCTCCATCTCCGAAATCACCGCTGATGATCTCAAGAAGCTTTCTACAAAAGCCCCTGATCTCAACAACTGGCTGAGTGCAGCTATCTCTTACCACCAAACCTGCATTGATGGCTTCCCCGAAGGGGAATTGAAGACACAACTTAAGGATGTCTTTAAGGATTCTCAAGAATTTGTTAGCAATTCGCTTTCTATTGTAACTGCAGTGTCCACAGTTCTTTCTGCCGTGCAATCAGTTTTGACTCGCCACTTGCTTTCGGAGAAAAACGGCAGCGCTACTCCTTCTTGGGTCAACAGCGAGGATCGGAGGATTCTGAAGGCGGCCGATGACAAACCCACCCCGAACGTAACTGTGGCAAAAGATGGCAGCGGCAACTTCAAAACCGTCTCTGAAGCCTTGGCAGCCATTCCAGAAAAATATGATGGACGCTACGTAGTTTATGTTAAAGAAGGAATATACGAGGAGACAGTGACTGTTACAAAGAAAATGGAAAACATGACCATGTATGGTGATGGATCACAAAAGAGTATCATCACTGGCAGCAAAAATTTTGTAGATGGAGTTAGGACTTTCCAAACTGCAACCTTTGTGGTGCTTGGAAATGGGTTCTTGGGCAAAGCAATGGGATTTAGAAACACTGCTGGGCCGGAGAAGCATCAAGCGGTGGCAGCCAGAGTTCAAGCAGACCGTGCAATGTTCGTTAACTGTCGCTTCGAGGGCTACCAAGACACACTATACGCCCAAACCCACCGCCAATTCTACCGGAGCTGTGTCATTTCCGGCACGGTCGATTTCATCTTTGGCGACGCAGCCGCCATCTTCCAGAACTGCATCATGACACTTAGAAAACCAATGGACAATCAACAAAACATCGTAACTGCTCAAGGCAGGTACGACCAAAAGGAGACAACTGGCTTCGTTCTGCAAAAGTGTGATATCAAAGCGGACGACAAGCTAGCTCCGGATAAGGACAAGATCAGGAGCTACCTTGGGAGGCCATGGAAGGAGTACTCGAGAACCATTGTAATGGAATCCGATATTGGCGATGTAATTCACCCTGATGGGTGGCTACCTTGGGAAGGCGACTTTGCACTCAAGACACTATTCTATGGTGAGTTCAACAACACAGGACCTGGTGCCAGCACCAATGCCAGGGTCAACTGGGTTGGCCGCAAAGTCCTTAGCAGGGATGAGGCTAGCAAGTTCACTGTAGGAACTTTCTTGGATGGAGCATGGTTTAGTGGTAGAGGCGTACCAACTCAATATGGCTTGTACAATTGA 1800 0.4778 MAFQDFDIINERRRQERRKKIQKRILIGLVSTILLVCIIGAAAYVGLNSKSSGGGGSDHGKSPSKPSHQPTTTSASASASTNTKALEASSKIVKVICEAAEYKDKCESSLGDAVKNDPNAQPKDLLKYSIKLAQDEVGKAFDKTTSMKFESEMDKGAYEDCKQLFDDAKEELGFSISEITADDLKKLSTKAPDLNNWLSAAISYHQTCIDGFPEGELKTQLKDVFKDSQEFVSNSLSIVTAVSTVLSAVQSVLTRHLLSEKNGSATPSWVNSEDRRILKAADDKPTPNVTVAKDGSGNFKTVSEALAAIPEKYDGRYVVYVKEGIYEETVTVTKKMENMTMYGDGSQKSIITGSKNFVDGVRTFQTATFVVLGNGFLGKAMGFRNTAGPEKHQAVAARVQADRAMFVNCRFEGYQDTLYAQTHRQFYRSCVISGTVDFIFGDAAAIFQNCIMTLRKPMDNQQNIVTAQGRYDQKETTGFVLQKCDIKADDKLAPDKDKIRSYLGRPWKEYSRTIVMESDIGDVIHPDGWLPWEGDFALKTLFYGEFNNTGPGASTNARVNWVGRKVLSRDEASKFTVGTFLDGAWFSGRGVPTQYGLYN 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02729 599 CDD PMEI-like_3 96 244 - -
Aip03g02729 599 Gene3D - 282 597 IPR012334 -
Aip03g02729 599 MobiDBLite consensus disorder prediction 52 80 - -
Aip03g02729 599 Gene3D Invertase/pectin methylesterase inhibitor family protein 89 243 IPR035513 -
Aip03g02729 599 Pfam Plant invertase/pectin methylesterase inhibitor 92 238 IPR006501 GO:0004857
Aip03g02729 599 ProSitePatterns Pectinesterase signature 2. 432 441 IPR033131 -
Aip03g02729 599 SUPERFAMILY Pectin lyase-like 286 587 IPR011050 -
Aip03g02729 599 PANTHER PECTINESTERASE 15 597 - -
Aip03g02729 599 PANTHER PECTINESTERASE 15 597 - -
Aip03g02729 599 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 91 241 IPR035513 -
Aip03g02729 599 Pfam Pectinesterase 288 583 IPR000070 GO:0030599|GO:0042545
Aip03g02729 599 SMART PMEI_2 88 238 IPR006501 GO:0004857
Aip03g02729 599 TIGRFAM PME_inhib: pectinesterase inhibitor domain 74 240 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02729 Aip-Chr3 53578270 53581716 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02729 1 599 Carbohydrate Esterase AT2G26450 49.679 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02729 - - gmx:100784679 765.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02729 03 53578270 53581716 Aip03g02729 03 53578270 53581716 ECH