Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02723 ATGCTCCGCCGCCCTCTCCACGGTGGCTCCAACGCCGTTCTCGCCAACGGAAGAACCGATCCTGGACAGAACACAGGTTTCTCGCTTCACAAGTGTGCCATAACACCAAGCTCCGATTTGTCTCCTGTGAAGCACTCTGTTAATTCTTATCTTGGGAGGCCCTGGAAGGAGTATTCTAGGGCCGTCGTGATAGGGTGTACCATAGACGACGCCATTGCGCAGCAGGGTTGGGTTCAGTGGCCTGGTTATGGAAGCTCGGTCTTGAGGACACTCTATTTTGGTGAGTATGGTAATTCAGGACCTGGTGCTGGAACTGCAAGAAGGGTTCAGTGGCCTGGTTTTCATGTCATGGGTAATGTTGAGGCTTCTAAGTTCACTGTTGGTAACTTTATTGCTGGAAGTTCATGGATTCCTTCCTCCGTCGGTTTCATCTCGGGTCTCTAA 444 0.5135 MLRRPLHGGSNAVLANGRTDPGQNTGFSLHKCAITPSSDLSPVKHSVNSYLGRPWKEYSRAVVIGCTIDDAIAQQGWVQWPGYGSSVLRTLYFGEYGNSGPGAGTARRVQWPGFHVMGNVEASKFTVGNFIAGSSWIPSSVGFISGL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02723 147 Gene3D - 1 147 IPR012334 -
Aip03g02723 147 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 54-RELATED 1 146 - -
Aip03g02723 147 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g02723 147 SUPERFAMILY Pectin lyase-like 3 139 IPR011050 -
Aip03g02723 147 Pfam Pectinesterase 2 133 IPR000070 GO:0030599|GO:0042545
Aip03g02723 147 PANTHER PECTINESTERASE 1 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02723 Aip-Chr3 53477060 53477510 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02723 3 147 Carbohydrate Esterase AT2G45220 52.740 1.12e-47 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02723 K01051 - csin:114272465 222.631