Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02713 ATGGCTTCTGACACTGTTCTTCCTTCCATGCCTCTAACCGTTGTTGGATACGTCACTAGTGCCACTCCAACTAAACACACTCACTCGCAGCATCACCGCCGTGCCTTTCTCATAACGGTAACGGTCATCGCCATTGCGGTTACCGTCTTCTTCGCTCTCTACTTCCTCCTCCGTGACCTCAGCCATTACTTCCGCCGTCAAGCTCATCCAATTAGCGTACGCACATCATCTGCGGTCTTCCCCTCCGTCTCCAGATTCGAGCAACGCGACCTTCTTCGTCTCCTTCCTCTCTGCTGCCACGCGTTCCATGCCGAATGCATTGACGTCTGGCTCCGAACGAATCTCACCTGTCCGCTCTGCCGATCCGCAGTGTTTTTTTCGGAATCCGACGTCGGGAAGATTCTCCGGTCATCGTCCTCCGCCGTCGGCGACAGCTTCCGCCTCGAGATAGGTAGCATCAGTCTCCGTGGAACCACGTCATCCGCCGCCGAAGAATCGCGCATGAGGACATATTCGGTTGGCGAGTTCGATTACCTCGTTGGCGAGGACGCTGAGATTTCTTACAGTCAGGCTCGCCGGAGAACCGATTCCGGCGAGAAAGATGATGCTGAGCCGGTGGAATCATCGGCGCCGAGCTTGGCCAGCGAGGTAGGCAGCAGATGGAGCTGGAAGGATTATTATGATTTGGTTTCAGCTTCGTTAACGTCAACGGCGTCTTTTCGAAGCTCCGGAAGGTTCTTCACTGGGAGTAGCAGGCGAAACGACGTCGTTGCAATTGGTGATGATGAAAGGGAAGCCAACCGTTTTAGGGAAGAAATCAGCGAAGTCTTTCGATGGCTTTCAATGGCATAA 852 0.5411 MASDTVLPSMPLTVVGYVTSATPTKHTHSQHHRRAFLITVTVIAIAVTVFFALYFLLRDLSHYFRRQAHPISVRTSSAVFPSVSRFEQRDLLRLLPLCCHAFHAECIDVWLRTNLTCPLCRSAVFFSESDVGKILRSSSSAVGDSFRLEIGSISLRGTTSSAAEESRMRTYSVGEFDYLVGEDAEISYSQARRRTDSGEKDDAEPVESSAPSLASEVGSRWSWKDYYDLVSASLTSTASFRSSGRFFTGSSRRNDVVAIGDDEREANRFREEISEVFRWLSMA 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02713 283 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 82 - -
Aip03g02713 283 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 83 271 - -
Aip03g02713 283 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 126 IPR013083 -
Aip03g02713 283 ProSiteProfiles Zinc finger RING-type profile. 98 121 IPR001841 -
Aip03g02713 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 82 - -
Aip03g02713 283 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 83 271 - -
Aip03g02713 283 SUPERFAMILY RING/U-box 86 127 - -
Aip03g02713 283 MobiDBLite consensus disorder prediction 190 211 - -
Aip03g02713 283 MobiDBLite consensus disorder prediction 190 206 - -
Aip03g02713 283 Pfam Ring finger domain 87 121 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02713 Aip-Chr3 53090598 53091449 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02713 86 125 C3H Transcription Factor Family AT2G18650 65.000 1.78e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02713 K10663 - gmx:100804962 226.868