Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02702 ATGGCCAAAGGTGGAGGAAAACTAATGAAGCTCAAGTCAGTGCTCAAGAAATGGAACTCATTCGGCAACATCACCACCACCACCAACAAGCAGAGCCGTTGCGGCGCCACCGTGAGCGCCGTCGCCAACGACGAACAATCCTCCGTGTCGGAAGCCGATTTCCGGCCCGTGTACGTGGGGAAGACGTGGCGGAGATACTTGGTGAGGCCGGACGTGGTGGAGCATCCACTTTTCCGAGAGCTCGTGGATAGATCACGTGAGTCCTACGACGACAACAACTTCGTCGTCGTGGAGGAGGACACTGTCCACGTGGCATGCGAGGTCGTGCTGTTCGAGCACCTGCTTTGGATGCTAGAAAACGCTGATCCTCAGCCTGAGTCACTCGACGAGCTCGTCGACTTCTATACTTGCTAG 414 0.5628 MAKGGGKLMKLKSVLKKWNSFGNITTTTNKQSRCGATVSAVANDEQSSVSEADFRPVYVGKTWRRYLVRPDVVEHPLFRELVDRSRESYDDNNFVVVEEDTVHVACEVVLFEHLLWMLENADPQPESLDELVDFYTC 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02702 137 Pfam Auxin responsive protein 13 118 IPR003676 GO:0009733
Aip03g02702 137 PANTHER SMALL AUXIN-UP RNA-RELATED 5 137 - -
Aip03g02702 137 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02702 Aip-Chr3 52707964 52708377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02702 4 120 Calmodulin-binding Proteins AT3G43120 25.694 3.25e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02702 - - mtr:MTR_2g044020 155.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02702 03 52707964 52708377 Aip03g02702 03 52707964 52708377 ECH