Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02698 ATGAGGAGGCAGAAGCTTTGCGAAGGTGTCCAGAATCTTGTAAATCTGAATTTAGTAGATCTTAATTATTTATCGCACCTAGTCGAGCTCCTAGGTTTCTCCAAGGCCCCAAATCTTGAAGAAGTAAATGTTTCCAACTGCAAGCGTCTGCAGCAAGTTCCCCTATCTGTTTTATCTTCTCAAAGGCTGAGTTATCTCTTTCTAAATGATTGTAATGAACTAAGAAGTTTCCAGCACAACATTCATTATCAATCTCTTAAGACATTCTCGTTCTATAGCTGCATTGGTCTCAGAGAGTTCTCGCTGACACAGCTTAACCACAGCACAGACAAATTGGTGTTATCAGCTCCGCTTGAACGGTTAAAACTGAATTACTGTTCCAATCTTTCTCTGCTTCCAGAGAATATAAGCATTCTTTCATCATTGAAGGACTTATCAATGTGTCACAGCAGTGTGAGAAGCTTGCCCGAAAGCATTAAGCATCTGTCACGGCTGAAATACCTCAACTTGAGTAATTGCGAGAGGCTTCAATCTATACCAGAGCTTCCATCGTCCATTTTGGGGTCCGGCCGAACTGGAAGTGGAAAATCAACTCTGATTCAAGTTTTCTTTAGGCTGGTGGAACCTTCAGGAGGCAAAATAATTATTGATGGCACTGACATATCAGTGTTGGGGCTTCATGATCTTAGATCTTGCTTTGGTATCATTCCTCAGGAGCCTGTCCTTTTCGAAGGAACTGTCAGAAGCAATATTGATCTAACTGGACAATACACAAATGAAGATATATGGAAGAGTTTGGAAAGGTGTCAACTAAAAGAGGCAGTGTCTGCTAAGCCTGAAAAGCTTGACTCTTTAGTGGTAGATAATGGAGAGAATTGGAGTGTGGGGCAGAGGCAGTTGCTTTGTTCGGGGCGGGTTATGCTTAAGCAAAGCCGGATCTTGTTTATGGACGAAGTATTCAAGTTGAGCACTGCAAGAAGTGCATAA 987 0.4195 MRRQKLCEGVQNLVNLNLVDLNYLSHLVELLGFSKAPNLEEVNVSNCKRLQQVPLSVLSSQRLSYLFLNDCNELRSFQHNIHYQSLKTFSFYSCIGLREFSLTQLNHSTDKLVLSAPLERLKLNYCSNLSLLPENISILSSLKDLSMCHSSVRSLPESIKHLSRLKYLNLSNCERLQSIPELPSSILGSGRTGSGKSTLIQVFFRLVEPSGGKIIIDGTDISVLGLHDLRSCFGIIPQEPVLFEGTVRSNIDLTGQYTNEDIWKSLERCQLKEAVSAKPEKLDSLVVDNGENWSVGQRQLLCSGRVMLKQSRILFMDEVFKLSTARSA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02698 328 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 320 IPR027417 -
Aip03g02698 328 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 190 319 - -
Aip03g02698 328 Gene3D Ribonuclease Inhibitor 3 113 IPR032675 -
Aip03g02698 328 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 190 319 - -
Aip03g02698 328 Gene3D - 187 325 IPR027417 -
Aip03g02698 328 Gene3D Ribonuclease Inhibitor 114 186 IPR032675 -
Aip03g02698 328 SUPERFAMILY L domain-like 6 182 - -
Aip03g02698 328 Pfam ABC transporter 190 319 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02698 Aip-Chr3 52531601 52533719 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02698 190 327 Calmodulin-binding Proteins AT2G36910 33.094 8.66e-18 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02698 - K05666 aip:107613764 313.153