Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02684 ATGCAGACACAACTCAGGCGCACTATTTTCACTTTCCTGCTGTTGTTCTCATCCCCAACATTTTTCGTCTTCTCCACCGCATCACCACCGTCAAAAAACAACCGCAGCAACAACGCGCAAGCCCTGGTCCGTTCATCATGCGTTCACACAAGGTACCCGAGCATCTGCCTCAGAACACTCTCAAACTACGCTGGGCCTGCCAACTCCCCCTTAGACGTGGCCCGGGCCGCTCTCAGGGTGAGCCTGGCCCACGCCCGACGAGCCTGCAGACACCTCAAGACTCTCCAATCACCACTGGTAGGCCCAGGCCCAGGCCCAAATACAGGCCCATTGAGCTCGAAGTCCAAGAGGCAGCGAGCGGCGCTGAGTGACTGCATCGAGCAGATGGCGGACTCGGTTGACGAGCTGAAGAGGAGCCTTGAGGAGCTCCAGCACCTCGAAACGGCGACGTTTCGGTGGCAGATGAGTAACGCACAGACTTGGGTGAGTGCTGCCCTCAGTAACGGCGACTCATGCCTCGATGGCTTTGGAGACGTAAGCAACGGCGGCGATAGAGGCAGTGGAGGCAACGACCGTGACAAGAAGCTGAGGAGGAGCGTGAAGCGGAGGGTGACTGACGTGGCAAGGGTCACGAGCAATGCTTTGTACATGATTAACCTTGTTGGTGAAACTTGGCCCGGGAAGCCTAATAAGCATCGTTCTTCGCCACGTGGCACCCATTTCAATGACTGCGTTGAGCATCCTGCTTGTGCTTAA 756 0.5688 MQTQLRRTIFTFLLLFSSPTFFVFSTASPPSKNNRSNNAQALVRSSCVHTRYPSICLRTLSNYAGPANSPLDVARAALRVSLAHARRACRHLKTLQSPLVGPGPGPNTGPLSSKSKRQRAALSDCIEQMADSVDELKRSLEELQHLETATFRWQMSNAQTWVSAALSNGDSCLDGFGDVSNGGDRGSGGNDRDKKLRRSVKRRVTDVARVTSNALYMINLVGETWPGKPNKHRSSPRGTHFNDCVEHPACA 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02684 251 TIGRFAM PME_inhib: pectinesterase inhibitor domain 114 219 IPR006501 GO:0004857
Aip03g02684 251 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 42 221 IPR035513 -
Aip03g02684 251 MobiDBLite consensus disorder prediction 177 200 - -
Aip03g02684 251 CDD PMEI-like_3 45 219 - -
Aip03g02684 251 Gene3D Invertase/pectin methylesterase inhibitor family protein 38 221 IPR035513 -
Aip03g02684 251 Pfam Plant invertase/pectin methylesterase inhibitor 42 216 IPR006501 GO:0004857
Aip03g02684 251 PANTHER PECTINESTERASE INHIBITOR 3 20 223 - -
Aip03g02684 251 Coils Coil 126 149 - -
Aip03g02684 251 MobiDBLite consensus disorder prediction 94 118 - -
Aip03g02684 251 PANTHER PECTINESTERASE INHIBITOR-LIKE 20 223 - -
Aip03g02684 251 SMART PMEI_2 38 217 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02684 Aip-Chr3 51842694 51843788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02684 32 224 Carbohydrate Esterase AT3G14310 28.718 6.77e-19 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02684 03 51842694 51843788 Aip03g02684 03 51842694 51843788 ECH