Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02682 ATGGACCACACAGGGCAACCAGATTCACAGGTATGCTTTGTCGGTGTCATTGAGCTTTTTTACCGTCCGATAATGCCGGGGGAGTCGAATGGGTTTGTGGAGCCTAGCTACGAGTTTTCATCTAATTTTGACCGAGTCCATGCGTCACAGGATGCTGATGATGGAATGAGCGGCGAAACCGTGCCGGTAGAGGAAGCAGAAGCGATGGATTCGTCCGCCGGAGATGCGGACATAGATGCAGAAGCAGTGGTGAGGATTGTTAACGGGATAGGGTCCTTTGGCGCCATTGAATTTTCTTCCTTGACAGCCAACGACGTCCTTACGACGGAGTTCACAAGCCTACAGGTAGCTCATGACTATTACAACGAATACGGTCGCATCAAGGAATTCTCGGTCAGGAGGTCCAAGGTGGGTCGCAGAACAAAGCAGGGGGCGGAAGGCGAAATCATTTGGCAGATATTCGTGTGCTCGAGGGAAGGAGAGCGAGATGGGAAACACATGCAGCAGGAAGACAGGAAGATGGATCCTCGACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGTTGATAATGCCAGCGGGCGATGGTTTGTTGAACAATTCTGTGATAACCATAATCATCCCATGCTGGATGCGAGGTTTAGGGGTCTGTCGCAGTCACACAGAGTAGTCAAGGAAGGCGATTTGCACCAAATCAATTCCATGAGAAAATCTGGGTTGCGGGTGCCGACAATTTTCCGCGCCTTTGCCAATCAGTCAGGAGGATTCGAGACTGTCGGGTTCGAGATAAAGGACATATACAATGCGATAGAGAAGCAAAGGCGGGCTGGCGCGACAGATGCTGAGGCCGTGTTGAAGCTCTTGGGAACTTTAAGGGCCACTGATTCTGGGATGTTCTAG 909 0.516 MDHTGQPDSQVCFVGVIELFYRPIMPGESNGFVEPSYEFSSNFDRVHASQDADDGMSGETVPVEEAEAMDSSAGDADIDAEAVVRIVNGIGSFGAIEFSSLTANDVLTTEFTSLQVAHDYYNEYGRIKEFSVRRSKVGRRTKQGAEGEIIWQIFVCSREGERDGKHMQQEDRKMDPRPITRCGCEARIKVHVDNASGRWFVEQFCDNHNHPMLDARFRGLSQSHRVVKEGDLHQINSMRKSGLRVPTIFRAFANQSGGFETVGFEIKDIYNAIEKQRRAGATDAEAVLKLLGTLRATDSGMF 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02682 302 Pfam FAR1 DNA-binding domain 119 213 IPR004330 -
Aip03g02682 302 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 67 225 - -
Aip03g02682 302 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 67 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02682 Aip-Chr3 51754532 51755817 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02682 FAR1 2.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02682 - - aip:107633138 534.643