Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02675 ATGTTTTTCCTTGAAACTGGCACTGCTCTGCTTCTGCTGGACTACTTCTCGGAACTGGCTACTCTGCTTCCGCGCTGCACAGCTTCTCTGCGTTGCACTGCTCACCAGAGAACCTTAGTCACATCGCCACCAACAGCGGCCGCGAAGTGTGAAGCTTTACCGCTTCCTTGTGAGGAGGACCGGCAGCAATTTCAATGCTGTGATACTGAAACGCTTGTTCGTGAGCAAGGTAAAATTGCCGTGGTAGTGGGAACTGTAACTGATGATATCAAAGTGTATGAAGTTCTTGCATTGAAGGTTACTACACTCAGGTTTATAGAGACTGCATGTGCTAGAATAGAGAAGGTTGGTGGTGAATGCTTGACATTTGATCAGCTTGCACTTAGGGCACCTCTCGGACAGAACGTAGTCCTTCTTAGAGGCCCAAAGAAGTCCAAGGAAGCTGTGAAACACTTTGGTCCTGCTCTTGGTGTTCCTCACAGCCATACCAAGCCTTATGTTGAGAAGCTTGTTGAGAAATCAGAGTtttga 531 0.4746 MFFLETGTALLLLDYFSELATLLPRCTASLRCTAHQRTLVTSPPTAAAKCEALPLPCEEDRQQFQCCDTETLVREQGKIAVVVGTVTDDIKVYEVLALKVTTLRFIETACARIEKVGGECLTFDQLALRAPLGQNVVLLRGPKKSKEAVKHFGPALGVPHSHTKPYVEKLVEKSEF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02675 176 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 76 169 - -
Aip03g02675 176 SUPERFAMILY Ribosomal proteins L15p and L18e 75 140 IPR036227 -
Aip03g02675 176 Pfam Ribosomal protein 60S L18 and 50S L18e 75 174 IPR021131 -
Aip03g02675 176 Gene3D - 60 176 - -
Aip03g02675 176 PANTHER 60S RIBOSOMAL PROTEIN L18 76 169 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02675 Aip-Chr3 51037229 51039818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02675 70 175 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 70.755 1.27e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02675 K02883 - qsu:112016228 163.31