Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02673 ATGAAGGCTCCTTCCAATGGTTTCTTGCCTAATTCTGGCGAAGGAGAAAAGAAAACAATCAATTCAGAGTTATGGCATGCTTGTGCTGGACCATTGGTTTCTTTACCTCCTATTGGAAGTCTTGTGGTTTATTTCCCTCAAGGACACAGCGAACAAGTTGCAGCATCCATGCAAAAGGAGGCCGACTTCGTACCAAGTTACCCGAACCTTCCATCCAAGTTGATTTGCATGCTTCACAATGTTGTCCTTCATGCTGATCCTGAAACTGACGAGGTTTATGCTCAAATGACCCTTCAACCTGTAAATAAATATGATAAGGAAGCAATACTGGCATCCGACATGGGTCTCAAGCAAAACCAGCAACCTACTGAATTCTTTTGCAAAACTCTCACAGCTAGTGACACAAGCACTCATGGTGGATTTTCTGTGCCTCGTCGAGCAGCCGAAAAAATATTCCCACCTCTGGACTTTTCGATGCAACCTCCGGCTCAGGAGATTGTTGCGAAGGATTTGCACGATAGTACATGGACATTTAGGCATATTTATCGCGGACAACCAAAGAGGCACTTGTTGACTACTGGATGGAGTGTCTTTGTTAGCACGAAAAGGCTATTTGCCGGAGATTCTGTTCTTTTCATTAGAGATGAAAAACAGCAACTTCTTTTAGGTATAAAGCGCGCTAATAGGCAGCAGCCGGCACTCTCTTCGTCGGTAATATCCAGCGACAGCATGCACATTGGCATTCTTGCTGCTGCAGCTCATGCTGCTTCAAATAACAGCCCTTTTACCATATTTTATAATCCAAGGGCAAGCCCGTCGGAATTTGTGATTCCGTTGGCCAAGTACAACAAGGCCATGTACACTCAAGTTTCTCTTGGTATGAGATTTAGAATGATGTTTGAGACTGAGGAGTCTGGAGTACGCAGATATATGGGTACAATCACCGGCGTTAGTGACTTGGATCCGGTCCGATGGAAAAACTCACAGTGGCGCAATCTTCAGGTTGGTTGGGATGAATCAACAGCTGGGGAGCGCCCAAGCAGAGTTTCGATCTGGGATGTTGAACCAGTAGTTACTCCTTTCTACATTTGTCCTCCTCGCTTTGTTGTTGATTTTGCAGAAGACGAGTCTGACATAGAAAATGCTTTTAAGAGAGCTATGCCCTGGCTTGGAGATGAACTTGGCATGAAGGATGCTTCAAGCTCAATCTTTCCTGGTTTGAGTTTAGTGCAATGGATGAGCATGCAGCAGCAGAACAATCAGTTCGCCGCCGCCCAATCCGGATTTTTCCCGCCATCTATGCTTTCATCCAATACACTCCATGGCAACCTTAACAATAATGATCAATCCAAGATATTGAACTTCCAAGCCCCAGTCCTCTCTGCACCAAATCTTCAATTCAACAAACCTAATCTACCCAACCAAGTCAACCAACTGCAGCAATCTATGACATCATGGCCCCAACAGCTGCAGCAGCCACAGCAGCAGCAGCAGCAGAAGCTGCAGTCATTGTTGCAATCGCCAGTAAACCAGCTTCAGCCACAGCAGCAGCAGCAACAGAGGCAACAGCAGCTGCCGGAGCCACAAAACTTGTCGCAGTCACAGCAACAGCAGCCCCAACTGCCTCAACAGAGAACACAGCAGCTGCAACAACCACAGCAGCAGCCGCCTCCACCGCAGCAACACCAACCTCAACAGTCATGTCAACAGCCAATTATGAATAATCGGGTAGTTACTTCTAATCAGTGTGTTCAAGTTCCACAACCGGTAACCTATTCTCAGCTTCAGCAACAGCAATTAGTCTCCGGAAGCATGCCGACACAACAAAGTATCCAACCTGCCAACAAGAATGCAATGCTAATGACATCCTTGCCATTAGACTCGCAATTTCAGCAACCGATAGATCAGCAAACTAGTCTCTTACAGAGGCAGCAGCAACAACCGACACAGTTGCAACAATCTCCATTGCAGTTCTTGCAACAAAGCACATCGCAGAGGGCATTGCAGCAACTTCAAGGGACTCAAATGTCACAGCAAAACGCCTCAGAGCAACAGTTACAGTTACAGCTGCTGCAGAAACTGCAACAGCAGCAGCAGCAGCAGCAGCAACAGCAACTTATTTCAACATCTAGTCCACTATTGCAGTCACAGCTTCTGCAGCAAAAAAATACTCATCTGGCAAACCAGCAACTACCGCAGCTGCCTCAATCGCAGCATCAACCTCAACAGCTAGGAAATAATTCATTCCCAATGGAGAAGCTTCTCAACAGCAACAGCTTCTCTTCTTCGTCTCTAATGCAGTCGCAACAGCTTTCGGTGAACCAACCAACCCTGAATGCACAGAAATCAGTTATAACTAGTAGAGCTCCTTCTAGTCTTACCGATGTAGACGTCCCGTCATGCTCGACTTCACCGTCTACTAATACCTGCCAGATATCTCCACCAAATCTCATGAAAAGAAATCAACAAGCACCAACCACATTTGGGGGAATGTCGGTTGTTGAGCCGACTAATAATTTGGTGCAAGAGCTTCATAATAAGTCTGATATGCAGATAAAACATGAATTATCCGGCATAAAAGGGCCTGACCAGCTTAAGTATAAAGGCACAATCAGTGATCAGCTGGAAGCTTCTTCGTCCGGAACATCTTACTGTATTGATCCGGGTAGCATCCACCAGAACTTCCAACTTCCAAACTTCTGCATGGATGGTGATGTTCAATCGCATCCTAGACAAAATCTACCATTTGCCTCCAATCTTGATGGACTAGCAGCGGATACCATGCTCTCAAGAGGTTATGACTCTCAAAAAGATCTTCAAAACTTGCTGGCTAACTATGGTGGTGCTCCAAGAGACATCGAAACAGAGCTGTCCACTGCCGCCATCAGCTCGCAGTCATTTGGGGTGCCAAACATGCCTTTCAAGCCTGGTTGCTCAAGTGATATTCCCATGAACGATGCTGGGGTTTTGAATAATGGCTTATGGGCTAACCAGACTCAGAGAATGCGAACATACACTAAGGTTCAAAAATGTGGTTCTGTTGGAAGATGTATCGACGTCACGCGATACAAAGGATATGATGAACTCCGCCACGATTTGGCTCGAATGTTCGGGATTGAAGGGCAGCTAGAAGATCCTCAAAGGACCGAGTGGAAACTAGTATATGTGGATCATGAGAATGACATTCTTCTTGTTGGTGATGACCCGTGGGAAGAATTCGTAAGCTGTGTTCAGAGCATAAAGATATTGTCGTCCGCCGAGGTGCAACAAATGAGTTTGGATGGGGATTTAGGCCAAGTTCCAATCCCTAATCAAGCATGTAGTGGCACGGAAGGTGGCAATGCATGGAGGGGACAGTACGACGATAACTCTGCCGCCTCATTTAATCGATAA 3393 0.4612 MKAPSNGFLPNSGEGEKKTINSELWHACAGPLVSLPPIGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVVLHADPETDEVYAQMTLQPVNKYDKEAILASDMGLKQNQQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGILAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGVSDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDVEPVVTPFYICPPRFVVDFAEDESDIENAFKRAMPWLGDELGMKDASSSIFPGLSLVQWMSMQQQNNQFAAAQSGFFPPSMLSSNTLHGNLNNNDQSKILNFQAPVLSAPNLQFNKPNLPNQVNQLQQSMTSWPQQLQQPQQQQQQKLQSLLQSPVNQLQPQQQQQQRQQQLPEPQNLSQSQQQQPQLPQQRTQQLQQPQQQPPPPQQHQPQQSCQQPIMNNRVVTSNQCVQVPQPVTYSQLQQQQLVSGSMPTQQSIQPANKNAMLMTSLPLDSQFQQPIDQQTSLLQRQQQQPTQLQQSPLQFLQQSTSQRALQQLQGTQMSQQNASEQQLQLQLLQKLQQQQQQQQQQQLISTSSPLLQSQLLQQKNTHLANQQLPQLPQSQHQPQQLGNNSFPMEKLLNSNSFSSSSLMQSQQLSVNQPTLNAQKSVITSRAPSSLTDVDVPSCSTSPSTNTCQISPPNLMKRNQQAPTTFGGMSVVEPTNNLVQELHNKSDMQIKHELSGIKGPDQLKYKGTISDQLEASSSGTSYCIDPGSIHQNFQLPNFCMDGDVQSHPRQNLPFASNLDGLAADTMLSRGYDSQKDLQNLLANYGGAPRDIETELSTAAISSQSFGVPNMPFKPGCSSDIPMNDAGVLNNGLWANQTQRMRTYTKVQKCGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGQVPIPNQACSGTEGGNAWRGQYDDNSAASFNR 1130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02673 1130 SMART B3_2 126 228 IPR003340 GO:0003677
Aip03g02673 1130 MobiDBLite consensus disorder prediction 1108 1130 - -
Aip03g02673 1130 MobiDBLite consensus disorder prediction 790 817 - -
Aip03g02673 1130 Coils Coil 681 701 - -
Aip03g02673 1130 Gene3D - 123 227 IPR015300 -
Aip03g02673 1130 ProSiteProfiles PB1 domain profile. 1003 1096 IPR000270 GO:0005515
Aip03g02673 1130 CDD B3_DNA 125 217 IPR003340 GO:0003677
Aip03g02673 1130 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Aip03g02673 1130 Pfam AUX/IAA family 1000 1089 IPR033389 -
Aip03g02673 1130 SUPERFAMILY CAD & PB1 domains 1017 1081 - -
Aip03g02673 1130 Gene3D - 998 1092 - -
Aip03g02673 1130 MobiDBLite consensus disorder prediction 733 756 - -
Aip03g02673 1130 Gene3D - 289 360 - -
Aip03g02673 1130 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1117 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aip03g02673 1130 MobiDBLite consensus disorder prediction 480 551 - -
Aip03g02673 1130 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Aip03g02673 1130 PANTHER AUXIN RESPONSE FACTOR 19 1 1117 - -
Aip03g02673 1130 MobiDBLite consensus disorder prediction 480 568 - -
Aip03g02673 1130 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aip03g02673 1130 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02673 Aip-Chr3 50669772 50676556 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02673 1 482 B3 DNA Binding Superfamily AT1G19220 80.164 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aip03g02673 AUX_IAA 2.5e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02673 K14486 - gmx:100804628 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02673 03 50669772 50676556 Aip03g02673 03 50669772 50676556 ECH