Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02658 ATGGATCCTAGACCAGTAACGCGATGTGGGTGTAATGCGCGGATAAAAGTTCATGTTGACTCAAGGAACGGGAGATGGTACGTTGAGTTCTTCTCGGATGAACATAACCATGAAATGTTGGAGGCAAGGTTTAGGGGAATGATGCGGTCTCACCGGGCAATAAAAACGGGGGATTTACACCAGATTAATACTATGAGAAGCTCTGGCCTTCGAGTTCCGACAATATTTCGGGCTTTTGCAAACCAAAGTGGTGGATTCGAGATGGTTGGGTTTCAGGTGAAAGACATCTATAATGCAATTGAGAAGCAAAGAAGAGCTGGAGCCAGCGACACGGATAATGCACTCAAGTATTTACAAATGTTGAAGAGTCGTGACCCCTGTATGTTTTGGAAGTATTCGTTGGATGAACAACGGAGGCTCCACAATATTTTTTGGTGTGATGGCGCAAGTCAGTATGATTTCAATGTTTTCGGAGATGTTATGGGGTTTGATGCAACGTATGGGAGGAATAAGTACAAATGTCCCCTTGTGATATTCTCTGGCGTGGATCACCACATGCGCACTGTTGTGTTTGGATGTGCGGTTCTCTCAAAGGAAGGGGAGGAAAGCTATGTGTGGTTGCTTCGGGCATTTCTGGAGGCCATGAAAGGAAAGGCTCCTAAGTCCGTTATTACCGACGGTGATCAAGCCATGAAGAGTGCAATCAAAGCTGTATTTCCAGAAGCACATCATAGATTGTGCAGCTGGCACTTGCTACGCAATGCGACCGCTCGAGTAGGTATTCCACGGTTCATGACCAAGTTTCGTCTTTGTTTAATGGGGGATTTGGAGGTCGATGACTTTGAAAATATATGGAATGATGCAGTTGAAGAATTTGGGTTGCAACAGAATTCATGGGTCAAGGATATGTATGAAAAGAAACATATGTGGTCAAATGCCCACATTAGGGGCAAGTTCTTTGCTGGGCTCAAGACAACATCAAGGAGAGTAGTGGTAGCTGATTACAAATCTGCTTATGGAGATCCGGTTGTGAAAACAAGATTGGAGGAGTTAGAGCGGTTTGCAGCAACAGTATACACACGAGAGGTCTTTCTCTTATTTCGGGAGGTGTTATTATTAGCTAGCAATGTCAGAGTAGTTTCTTCGAAGAAGACAAGCACGTGTACATTGTTTGAGGTGGCCATGTATTGCCAAGGTAGATCATGGAATGTTTCGTGGGGGGAGATAGATGATGAATTCAGATGCTCTTGCTTGCGCATCTCTTTTGGAATCCCCTGTGTCCACATAGTTGGTGTGCTTGTTACACTAAACATGGTTGTTATTCCAGATAGTCTTATACTGGGTCGTTGGACAAAGAAGGCAAAACAACCACCAATAAATAACCATGTATTTAGTGGAGAGATTCCTGATGCAGCCTATATGAGTATGCATGCGGCAATTCTCGATGACTGTAGAGAACTGGTAAAGCTTTCTTGTAGTTACTTTGAGGATTACTACGAGGTGAAGACCAAAATAGCTAATGAACGAGACGCGTTAAGAGAAAAGATCCGGAAAAGGTTGGCGACCACTGCTGAGGGCGGGGGCGATGATGCGTCCATACACGATCCTCCGAGAGCCAGACATAAAGGGTGTGGTCGTCATGTTGTGACGACTCGTGGGAGGTACCGGCGTGTCCAACGCTGCAGAAAGTGTGGCAAGGCTGGCCATAACGCTCGTAGATGCGCAGACGAGAATGGTGACGATACCACGCATGTATTAGATGCTTTTGGATCATCGCACAACATGGACGAGTTAGAAGAAGCTGAGGCTTCACAACAGATGGAGTACGATGGTCTGAGCTTTTAA 1845 0.4537 MDPRPVTRCGCNARIKVHVDSRNGRWYVEFFSDEHNHEMLEARFRGMMRSHRAIKTGDLHQINTMRSSGLRVPTIFRAFANQSGGFEMVGFQVKDIYNAIEKQRRAGASDTDNALKYLQMLKSRDPCMFWKYSLDEQRRLHNIFWCDGASQYDFNVFGDVMGFDATYGRNKYKCPLVIFSGVDHHMRTVVFGCAVLSKEGEESYVWLLRAFLEAMKGKAPKSVITDGDQAMKSAIKAVFPEAHHRLCSWHLLRNATARVGIPRFMTKFRLCLMGDLEVDDFENIWNDAVEEFGLQQNSWVKDMYEKKHMWSNAHIRGKFFAGLKTTSRRVVVADYKSAYGDPVVKTRLEELERFAATVYTREVFLLFREVLLLASNVRVVSSKKTSTCTLFEVAMYCQGRSWNVSWGEIDDEFRCSCLRISFGIPCVHIVGVLVTLNMVVIPDSLILGRWTKKAKQPPINNHVFSGEIPDAAYMSMHAAILDDCRELVKLSCSYFEDYYEVKTKIANERDALREKIRKRLATTAEGGGDDASIHDPPRARHKGCGRHVVTTRGRYRRVQRCRKCGKAGHNARRCADENGDDTTHVLDAFGSSHNMDELEEAEASQQMEYDGLSF 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02658 614 ProSiteProfiles Zinc finger SWIM-type profile. 402 437 IPR007527 GO:0008270
Aip03g02658 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 328 IPR031052 GO:0006355
Aip03g02658 614 Pfam FAR1 DNA-binding domain 3 40 IPR004330 -
Aip03g02658 614 ProSiteProfiles Zinc finger CCHC-type profile. 560 574 IPR001878 GO:0003676|GO:0008270
Aip03g02658 614 MobiDBLite consensus disorder prediction 523 544 - -
Aip03g02658 614 PANTHER OS02G0262500 PROTEIN 2 328 - -
Aip03g02658 614 Pfam MULE transposase domain 160 254 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02658 Aip-Chr3 50192711 50194657 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02658 MULE 1.4e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02658 - - adu:107488338 1170.99