Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02657 ATGTCTAGTTCGTCGGAATACTCGGAAATTTCCGGCCAGAAGCCGGCGAGGTCACCGGAAAAATCGAGCTTCTCTCAGACTTGCAGTTTGTTGAGTCAATACATCAAAGAAAAGGGCAACTTTGGAGATCTTACCCTCGGCATCACATGCAACACCGAACCAAGTGGGTCACCTGAAACATCGTGTCAGTCTGCAACAACTATGAACCTATTTCCTACCAAAGAAAACAACGTTGCACCAAAAAGCCTCACACTCACTGGCACAGCCATGGATTTGCTCTCTCCACAAGGTGCTTATCGTGCCAATCTTCCCTCTGAAGAAATTCCAAACTTGATCAATTCCAGTGCAGTTAAGTCTGTGAGCAAGGGCCTGAAAACTGCACAATTGACAATCTTCTATAATGGTCAAGTTGTTGTGTTGGATGATTGTCCTGCTGAGAAGGCGAACGAGCTCATGGCTTTTGCCAAGAAAGGAGTCTCTCAAAGCCAGAACAACTCTGTCTACACCTACACTCAGAGCCAGCCTTCATTTCCTCCTAATTTGGCCAGAACATCTGCTGCTGATTCGAGTGTTCAAGCCTTTCCTAACGTGAATATCGTTGCTAGTTCCGGTAGCAATTCGATCCATGAGCACTCAAAACCTCAGTCCAGACCTGTTGTTTGTGGTAAATTATTCTTTTGGATCTACTATTTGTAA 696 0.4511 MSSSSEYSEISGQKPARSPEKSSFSQTCSLLSQYIKEKGNFGDLTLGITCNTEPSGSPETSCQSATTMNLFPTKENNVAPKSLTLTGTAMDLLSPQGAYRANLPSEEIPNLINSSAVKSVSKGLKTAQLTIFYNGQVVVLDDCPAEKANELMAFAKKGVSQSQNNSVYTYTQSQPSFPPNLARTSAADSSVQAFPNVNIVASSGSNSIHEHSKPQSRPVVCGKLFFWIYYL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02657 231 MobiDBLite consensus disorder prediction 1 22 - -
Aip03g02657 231 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 16 200 IPR040390 -
Aip03g02657 231 Pfam tify domain 126 155 IPR010399 -
Aip03g02657 231 SMART tify_2 122 157 IPR010399 -
Aip03g02657 231 ProSiteProfiles Tify domain profile. 122 157 IPR010399 -
Aip03g02657 231 PANTHER PROTEIN TIFY 10A-LIKE 16 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02657 Aip-Chr3 50048683 50051549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02657 1 162 Tify Gene Family AT1G19180 42.331 1.78e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Aip03g02657 tify 1.7e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02657 K13464 - gmx:100812618 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02657 03 50048683 50051549 Aip03g02657 03 50048683 50051549 ECH