Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02652 ATGGCCGCTGTTCGCTCTAACAACCACAACCGCCGCAGTCACGTTTTCTGCGTGTTCTTGTTCATTGCTGTCTCTCTCTACAGCCTCCCACTGTCTCTCTCAGGCGACGCGGAGTCCCTTCAAAAGCTGAAACAATCCTTCACCAACGGCGATCGCTTGCTGTACACGTGGGAACCCAACACGTCACCTTGCGAAAACTGGATGGGCCTGGTGTGCGCCGACGGCATGGTAATGGGCATTCGCCTCTCCGACATGGGCTTGTCTGGTACCATCAACATAGACGCTCTTGCCGAGATCCCCGGGCTCAGGACCCTAAGCTTCACCAACAACAGCTTCACGGGCCCAATCCCTGACTTCAGCAGGCTCGGCGCCATCAAAGTCCTCTTGCTCTCCTACAACCAATTCTCCGGGCCCATCCCTTCCGATTTCTTCTCCAAATTGACTTCCCTAAAGAAAGTTTGGATCGACTCGAATAGCTTCTCCGGCCAGATACCCGAATCTTTGATGGAGCTAGCGCTTCTCAAAGAGCTTCACATCGAGAACAACCACTTCACCGGAAGGATACCCGCTGTGAAGGAAGATTTGACCTCGTTCAACGCGTCCTACAACAACCTCGAAGGTCCTATACCGGAAGCGCTGGCTAGGTTCGGTGAGAATGCGTTTGCTGGTAGCGGGAACGAGAAGCTTTGCGGGAAGCCGTTGAGGAGAAGCTGCGATAGTAGTGGCTTGCCTTCCTCGTCTTCGTACACGTTACCACCGCTTGATAAGAATCAAGGGTCAGGGTCAGGGTCAGGGTGGGGCATGAAGATTATCCTGTTTCTGTTCTTGGCTGCAGTGGCAGCGCTTGTGTTCGTGTTCGTAAAGGCGCGGCGGAGGAACGATGAGTTCGGGTTGATGGGGAGAATAAACAGTGTGGATTCGATGGTGGACATTCACGTGGCGAGTACGAACGGCTACAGGGCGCCGGAGGGANNNNNNNNGGATTTGATGAAGGCGTCGGCGGAGGTGCTTGGGAACGGGGGGCTGGGATCGGCGTACAAGGCGGCGATGACGAACGGGCTGTCGGTGGTGGTGAAGAGGATGAGGGATATGAACAAAATGGGAAGGGATGTGTTTGACGCTGAGATGAGGCAGTTTGGGAGGATGAGGCATAAGAATATATTGGGGCCTTTGGCTTACCATTACCGTCGGGAGGAGAAGCTCTTCGTTACTGAGTATATGCCCAAAGGCAGCTTGCTTTATGTCTTGCATGGTGACAGAGGAACAGCCCATGCAGAGTTGAACTGGCCGACCAGGTTAAAGATTGTGAAGGGAATAGCAAGAGGGTTGTCATACCTCTACACTCAATTTTCCACCTATGACCTTCCCCATGGAAACCTCAAGTCCAGCAATGTCCTCCTCAGTGATGACTATGAGCCTCTCTTAGGTGACTTCGGATTCCACCCACTCATCAACCCCACGGCCGCCGTTCAAGCCATGTTCGCCTACAAATCCCCTGACTATATCCAGTACCAAAAGGTCTCCCAGAAGACCGACGTCTTCTGCCTCGGAGTCCTCATCCTCGAGATCATTACCGGCAAGTTCCCTTCCCAGTATCATAGCAATGGAAAGGGTGGCACCGATGTTGTTCAACGGGTATTCACGGCGATTTCCGAGTCCAGGGAAGCAGAACTCATCGATCCAGAGTTGCAAGGGAACATGGGATCGCAAACTCAGATGTTGCAGCTTATCCACATTGGTGCTGATTGCACCGAGAGCAATCCTGACAAAAGACTTGCCATGAAGGAAGCCATTAGAAGGATAGAGGAGGTTCAAGTGTAA 1821 0.5266 MAAVRSNNHNRRSHVFCVFLFIAVSLYSLPLSLSGDAESLQKLKQSFTNGDRLLYTWEPNTSPCENWMGLVCADGMVMGIRLSDMGLSGTINIDALAEIPGLRTLSFTNNSFTGPIPDFSRLGAIKVLLLSYNQFSGPIPSDFFSKLTSLKKVWIDSNSFSGQIPESLMELALLKELHIENNHFTGRIPAVKEDLTSFNASYNNLEGPIPEALARFGENAFAGSGNEKLCGKPLRRSCDSSGLPSSSSYTLPPLDKNQGSGSGSGWGMKIILFLFLAAVAALVFVFVKARRRNDEFGLMGRINSVDSMVDIHVASTNGYRAPEGXXXDLMKASAEVLGNGGLGSAYKAAMTNGLSVVVKRMRDMNKMGRDVFDAEMRQFGRMRHKNILGPLAYHYRREEKLFVTEYMPKGSLLYVLHGDRGTAHAELNWPTRLKIVKGIARGLSYLYTQFSTYDLPHGNLKSSNVLLSDDYEPLLGDFGFHPLINPTAAVQAMFAYKSPDYIQYQKVSQKTDVFCLGVLILEIITGKFPSQYHSNGKGGTDVVQRVFTAISESREAELIDPELQGNMGSQTQMLQLIHIGADCTESNPDKRLAMKEAIRRIEEVQV 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02652 606 Gene3D Ribonuclease Inhibitor 146 239 IPR032675 -
Aip03g02652 606 Pfam Leucine rich repeat N-terminal domain 35 72 IPR013210 -
Aip03g02652 606 Gene3D Phosphorylase Kinase; domain 1 337 407 - -
Aip03g02652 606 ProSiteProfiles Protein kinase domain profile. 331 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02652 606 SUPERFAMILY L domain-like 35 216 - -
Aip03g02652 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 327 606 - -
Aip03g02652 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 316 - -
Aip03g02652 606 Gene3D Transferase(Phosphotransferase) domain 1 408 606 - -
Aip03g02652 606 Gene3D Ribonuclease Inhibitor 35 145 IPR032675 -
Aip03g02652 606 SUPERFAMILY Protein kinase-like (PK-like) 335 601 IPR011009 -
Aip03g02652 606 Pfam Protein kinase domain 335 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02652 606 PANTHER LRR RECEPTOR-LIKE KINASE 327 606 - -
Aip03g02652 606 PANTHER LRR RECEPTOR-LIKE KINASE 13 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02652 Aip-Chr3 49625277 49627658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02652 15 606 Receptor kinase-like Gene Family AT3G42880 46.379 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Aip03g02652 Pkinase 8.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02652 - - ahf:112738359 1141.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02652 03 49625277 49627658 Aip03g02652 03 49625277 49627658 ECH