Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02604 ATGATGAACAACAGTAGCAGCAGCAGTAGTAGTAGGAACAGTAGGTTTCCTTTCACCCCATCACAGTGGCAAGAACTTGAACACCAAGCTCTAATATACAAATACATGGCTTCAGGTACCACTGTCCCTCCTGATCTTCTCTTCACTCTCAAAAGAAGCCATTTCAATTTGCCTCATCACCAACCAGCTCAACAACAACACTTTGGATGGAACTATCTTGAAATGGGTTTGGGAAGAAAAATAGACCCGGAACCAGGGAGGTGTAGAAGAACAGATGGAAAAAAATGGAGGTGCTCAAAAGAGGCATACCCAGATTCAAAGTACTGTGAAAGGCACATGCACCGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAACTTTTGAAAACAACAACAAACACAAGCAATAGTGCTTCTTCAGCAACAACCCACACCATCATCTCATCATCATCAATCACTAAAACTAATGAGCACCCTCAACAACGTTCTTGCTATAATAATGGTTCAAATCTTCTTCATCAGCATTCCTTTGTCTTCAATTCCCACACTCCATCAAGGTCATCAACATCTGCTGTTGCTTTTTCATTTCCAGACAACACTGCTCCCTCCAGTAGGTACGTCTATGGAGTGAAAGAGGAAGCGGATGAACGTGCTTTCTTCAAAGAACCTTCTAGCACATTGAAAAGCTTCTCTGGATCCTCCATGGACGATTCATGGCAACTCACACCATTGACCATAAGCACCTCATCTTCTTCTTCCTCCACAAAACAGAGGAGTTGCACAAGTTTATCCAACAATAGTGACTACTCGTACTTGCAACTTGAGAGCCTCAATGAGCGCTCAAAAAATCAAGAACAAGATCAGAAGACTACTGTTCATAGCTTCTTTGATGAATGGCCCCACAAAGGCAGAGGATTTGATTCCGATGACAAATGTTCTTCCACAACCAAATTATCAATTTCCATTCCATCAACATCTTTTCATGACTTTCCCGTCCTTCAGTTCAAGAACCCACCTGGCTGCTGA 1023 0.4262 MMNNSSSSSSSRNSRFPFTPSQWQELEHQALIYKYMASGTTVPPDLLFTLKRSHFNLPHHQPAQQQHFGWNYLEMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVELLKTTTNTSNSASSATTHTIISSSSITKTNEHPQQRSCYNNGSNLLHQHSFVFNSHTPSRSSTSAVAFSFPDNTAPSSRYVYGVKEEADERAFFKEPSSTLKSFSGSSMDDSWQLTPLTISTSSSSSSTKQRSCTSLSNNSDYSYLQLESLNERSKNQEQDQKTTVHSFFDEWPHKGRGFDSDDKCSSTTKLSISIPSTSFHDFPVLQFKNPPGC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02604 340 PANTHER GROWTH-REGULATING FACTOR 6 13 324 - -
Aip03g02604 340 Pfam WRC 83 125 IPR014977 -
Aip03g02604 340 Pfam QLQ 17 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip03g02604 340 ProSiteProfiles QLQ domain profile. 17 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip03g02604 340 SMART QLQ_2 16 52 IPR014978 GO:0005524|GO:0005634|GO:0006355
Aip03g02604 340 ProSiteProfiles WRC domain profile. 82 126 IPR014977 -
Aip03g02604 340 PANTHER - 13 324 IPR031137 GO:0005634|GO:0006351|GO:0032502
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02604 Aip-Chr3 47810719 47813122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02604 2 125 GRF Transcription Factor Family AT3G13960 61.538 1.72e-50 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Aip03g02604 WRC 6.9e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02604 - - gmx:100814271 367.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03407 01 137035561 137037779 Aip03g02604 03 47810719 47813122 PCT