Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02584 ATGAATGAGCAATACCAGGAGGACGATGACTTTAACCAACAAGAAGAGCTAGTAAGTGACCAAGATATGATGGATGAACAGAATGAATTCGAACAAGATTTCATATATGAATTTACTGAGGGAGCATTTTTTTCTGAATCTGATATGTCAGAAGATATCCTTGAAGCCGCTTATGCGGTTGACTCCGTGCAAGACATTACAACTTTGAAATTTAGTGAGAATTTTGCGGAGGAAATTGGCAAATACCACTTTTCTACTTTGCAGCTTGCATTTAATTTTTATATGAAGTACTCAAAGTCGAAGGGCTTTAGTGCAAGGAAGAGCAAGACCTTCAAGAATAGTACTGGCGAGATTTACAAACAAAAGTTTGTATGTCATAGGCAAGGATTCAGGATGGAGAAATATTACACGATGGAAAAAAGGCAGAAGGAGCCTAGATTGGAAACAAGAACTGGATGTGAAGTCCAAATGGATGTTAAATTTGTACCAGAAAGTGGAAGGTGGCATATCTTTTATTTCTCTGATGAACACAACCATGATCTATTGGATACACAATTCAGTGCTATGTTGCCTACCCACAGAAAAATGTCAGAGGCAGATATTATGCAAATGATGAACATGCTAAAGTCAGAGATTAGCACCTCACAGATATTTAGTCTTCTAGCTAGTCAAGCAGGCAGGTACGAATTTGTTGGCTATGGTCCCAGAGATATGTACAATGAGATTGCTCAGCAAAGGCGTCAAATTCCTGGTGATGCAGCACGAGTGTTGAAGAAGTTGGAGGATATGCGGTTGAAGGATCCACAATTATATTTCAAGGCATGTCACGATTCAAGAGGTTTGTTACGTAATTTGTTCTGGTCTGATGGGATTAGCCAACTAGACTACCGACTCTTCGGGGATGTTATTGCTTTTGATGATACGTACAAGAAGAACAAGTATAGTTGTCCATTAGTCATATTCAGCGGGATTAACCACCACAACCAAACAATTGTTTTTGCTGCTGCGTTAATTGTAGACGAAACTACTGATACATATATTTAG 1044 0.3879 MNEQYQEDDDFNQQEELVSDQDMMDEQNEFEQDFIYEFTEGAFFSESDMSEDILEAAYAVDSVQDITTLKFSENFAEEIGKYHFSTLQLAFNFYMKYSKSKGFSARKSKTFKNSTGEIYKQKFVCHRQGFRMEKYYTMEKRQKEPRLETRTGCEVQMDVKFVPESGRWHIFYFSDEHNHDLLDTQFSAMLPTHRKMSEADIMQMMNMLKSEISTSQIFSLLASQAGRYEFVGYGPRDMYNEIAQQRRQIPGDAARVLKKLEDMRLKDPQLYFKACHDSRGLLRNLFWSDGISQLDYRLFGDVIAFDDTYKKNKYSCPLVIFSGINHHNQTIVFAAALIVDETTDTYI 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02584 347 PANTHER OS02G0262500 PROTEIN 79 346 - -
Aip03g02584 347 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 79 346 IPR031052 GO:0006355
Aip03g02584 347 Pfam FAR1 DNA-binding domain 92 182 IPR004330 -
Aip03g02584 347 Pfam MULE transposase domain 302 346 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02584 Aip-Chr3 46172781 46173824 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02584 FAR1 5.5e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02584 - - aip:107633123 707.212