Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02583 ATGGAGAACGGAGAGGAAAAAGGCGTGGCGGCACATAGAACAGTAGGGACAAAGAACGAGGTTGTTCTTCGAATTCCCGAGAGCGAAAACATCATTTCCTATTCTCCTCAGCAGAAGGGTTCACCCTCAAAAGCCTTCGTAGATTCTTCAAATGTTGAACTAGCAGCTGAACTTCAGAGTCTAAAAAACGGTAGTACTGTTCAATCTCCAACTGCTACCACTTCAACCCGCTCTGTTGGTCGTTCCGAATTCTCGAAGCCAAAATCCAGATTGGTGGAACCGCCACATCCAATAGCCGCAAGCTTTCTTGAAGACAAAACCCAAATCAAGAGCTTCAAATCACCCGCAAGGACTTCCACCAGCAAAAAGACTACTCCTAATGCCACACCTCCAAGGGATGTTCCTATTACCCCAAGAACCCCTTTGATTGGGACTCCAATGGAAGAAGAAGAAGAGGAGGAGGAGGAGTTTTACAAGACCACAAACGTTGAAGTGAGCAAGAAGAGATCTGGTAAGAGGTGGAAGTTCCTGTGTATGATTGAGTGGCTTGGTTTTGTTTCCGTTGTTGGGTTCTTGATTGTATCCTTAGCAATCAAAAGGTTGCGAAATTCCGAAATATGGGGCTTGGAGCTGTGGAAATGGTGTGTTCTTGCACTGGTTATCCTCTGTGGGAGACTTGTCACTGGGTGGTTTATAAATGTTATGGTTTTCTTGATTGAAAGGAATTTCTTGTTCAAGAAGAAGGTTCTGTATTTTGTTTATGGTGTGAAGAAGAGTGTTCAAGCATTTTTATGGTTGGGCATTGTTCTTATGGCATGGGGTTTGATTTTCAATCATGGGGTTAAGAGATCGAGAAGAGTTAATAGGGTTCTTGATTACATTACAAGATCTCTTGCATCTTGTCTTATTGGGGCAGCTCTATGGTTGGCGAAAATGTTGCTGATTAAGCTACTAGCTTCGCATTTCCAATCGGCTAGGTTTTTCAACCGGATTCAAGAGTCGATTTTTCATCAATACATTCTTCGGACCCTTTCAGGGCCTCCCTTGATGGAAATTGCGGAAAATGTGGGAAAGAATTCGAGTAGCGGCCGGTTGAGTTTTAAGACTTTGGTTAGGGAGAATGGGAATGAAGAGAAGAAAGAAGAGGTCATTGATGTGGACAAGCTCAAGAAAATGAAACAAGAGAAAGTTTCTGCTTTGACTATGAAAGGATTGATCAATGTGATAAAGAGTTCCGGATTGACCACGATTCTGCCGCAGAGTGTTGATGAAGATGAGAATGAGCAGATAGATAGTGAGATTACTAGTGAGTTGGAAGCAAAGGCAGCAGCATATCGAATTTTCAGCAATGTAGCCAAGCCAGGAAGCAAGTACATTCAGAAGGAAGACCTATTGCGCTTCATGACCAATGAAGAAGTTGAAAACCTGCTTCCGTTATTTGAAGGAGCAGTTGCAACTGGAAGAATCAAGAGGAAGTCTCTCAAGAATTGGCTGGTGAAAGTCTACCAAGAGCGTCAATCCCTTGTGCATTCGCTAAATGATACAAAAACAGCTGTCGATGATTTGAACTTGCTTGCTTCCGTGCTCATCATTATTGTGATCATCATTGTTTGGTTGCTTATAATGGGGTTCCTCACAACCCATGTTCTTCTCTTTATTACATCTCAGCTTTTACTCGCGGCGTTTATATTTGGTAACTCAGCTAAGACTGTCTTTGAAGCTATTATATTTGTTTTCGTGAGGCATCCATTTGATGTTGGCGATCGTTGTGTCATCGATGGTGTTCAGATGACTGTTGAGGAGATGAACATACTAACTACAATCTTCTTGAGATATGACAATGAAAAGATTTCATATCCAAATTCAGTTCTAGCAAACAAGCCTATCAGTAACTTCTACAGGAGTCCAGAAATGAGCGAATCAATCGAATTTTCTGTCGATATGTCGACACCAATTGAGAGTATCGCAGCTCTGAAGTCAAGAATAAAATCGTAA 1995 0.4195 MENGEEKGVAAHRTVGTKNEVVLRIPESENIISYSPQQKGSPSKAFVDSSNVELAAELQSLKNGSTVQSPTATTSTRSVGRSEFSKPKSRLVEPPHPIAASFLEDKTQIKSFKSPARTSTSKKTTPNATPPRDVPITPRTPLIGTPMEEEEEEEEEFYKTTNVEVSKKRSGKRWKFLCMIEWLGFVSVVGFLIVSLAIKRLRNSEIWGLELWKWCVLALVILCGRLVTGWFINVMVFLIERNFLFKKKVLYFVYGVKKSVQAFLWLGIVLMAWGLIFNHGVKRSRRVNRVLDYITRSLASCLIGAALWLAKMLLIKLLASHFQSARFFNRIQESIFHQYILRTLSGPPLMEIAENVGKNSSSGRLSFKTLVRENGNEEKKEEVIDVDKLKKMKQEKVSALTMKGLINVIKSSGLTTILPQSVDEDENEQIDSEITSELEAKAAAYRIFSNVAKPGSKYIQKEDLLRFMTNEEVENLLPLFEGAVATGRIKRKSLKNWLVKVYQERQSLVHSLNDTKTAVDDLNLLASVLIIIVIIIVWLLIMGFLTTHVLLFITSQLLLAAFIFGNSAKTVFEAIIFVFVRHPFDVGDRCVIDGVQMTVEEMNILTTIFLRYDNEKISYPNSVLANKPISNFYRSPEMSESIEFSVDMSTPIESIAALKSRIKS 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02583 664 SUPERFAMILY Sm-like ribonucleoproteins 573 632 IPR010920 -
Aip03g02583 664 Pfam Mechanosensitive ion channel 526 662 IPR006685 GO:0016020|GO:0055085
Aip03g02583 664 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 18 663 IPR016688 -
Aip03g02583 664 MobiDBLite consensus disorder prediction 60 82 - -
Aip03g02583 664 Gene3D - 583 632 IPR023408 -
Aip03g02583 664 PIRSF Memb_At2g17000 9 664 IPR016688 -
Aip03g02583 664 MobiDBLite consensus disorder prediction 60 100 - -
Aip03g02583 664 MobiDBLite consensus disorder prediction 113 141 - -
Aip03g02583 664 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 18 663 - -
Aip03g02583 664 MobiDBLite consensus disorder prediction 113 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02583 Aip-Chr3 46165967 46169558 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02583 68 662 Mechanosensitive Ion Channel Family AT5G12080 51.661 0.0 614
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02583 K22048 - gmx:100777332 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02583 03 46165967 46169558 Aip03g02583 03 46165967 46169558 ECH