Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02576 ATGCTGACGTGCATAGCTCGGCCGAAGAAACTCGGGGAAGACTCACTGAGTCACCCGGACGATCCCAATTCCAGCATCGGAAAGAATCAATCCGTCAAGTCCATCACCTCTCAGTTAAAGGATATGGCGTTGAAGGCGTCGGGTGCGTACAAGAACTGCAGTCCGTGCGCGCCGCCGAGTCGACTCAGGACAGCCAGTGGAGTGGGCGGTGCCAGTATTGGAAGCGGTGGAGACTCGGATGGGGACTCGGATCGGTTCCGGTGGTCGTACAGACGGACAGGGAGCTCAAGCTCGTCGGCGGGGACAAGGACAGGGTGGGGAAAGGAGATGGAGGCGAGGCTTAAGGGGATATCNNNNNNNNNNNNNNGCGTCTTGATCACGTTCGTGTCGCTTCCCCGTGGCGGGAACGACCTCAAGCGCATACGATTCAGTCGGGAGATATTTAACAAATGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCCAAGCTTTCCCTCTTCCAACTCCACCACGGTCTGAAGATGAGAGTTCAAAGCGTGAATCAATAGAAGACAGCCCTGTAACACCTCCACTAACCAAGGAACGGCTACCTCGAAATTTGTACCGCCCAACAGGGGTGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTACAATGATTCAAACGGTCTGAACTCAACCCCAAAGGTTTCAACCATTAGCGCTGCCAAGACAGAGATGTCATCGATGGATGCTTCTATAAGTAGCTCATCCAGAGAAGTGGACCATTCCGGGGAACTATCAATGAGCAATGCTAGTGACTTGGAGACTGAATGGGTTGAGCAGGATGAACCTGGAGTCTACATTACCATTAGAGCACTCCCAGGTGGCAAACGGGAGCTCAAACGAGTGAGGTTCAGCCGAGAAAAATTCGGGGAGATGCATGCTCGACTTTGGTGGGAGGAGAATCGTGCCAGAATACATGAACAATACTTGTATCTTTATAAATGA 1056 0.5076 MLTCIARPKKLGEDSLSHPDDPNSSIGKNQSVKSITSQLKDMALKASGAYKNCSPCAPPSRLRTASGVGGASIGSGGDSDGDSDRFRWSYRRTGSSSSSAGTRTGWGKEMEARLKGIXXXXXXVLITFVSLPRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRLNRQAFPLPTPPRSEDESSKRESIEDSPVTPPLTKERLPRNLYRPTGVGMGYSSSDSFDHQSMQSRHYNDSNGLNSTPKVSTISAAKTEMSSMDASISSSSREVDHSGELSMSNASDLETEWVEQDEPGVYITIRALPGGKRELKRVRFSREKFGEMHARLWWEENRARIHEQYLYLYK 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02576 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 124 347 IPR044532 -
Aip03g02576 351 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 118 IPR044532 -
Aip03g02576 351 ProSiteProfiles BRX domain profile. 292 347 IPR013591 -
Aip03g02576 351 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 118 - -
Aip03g02576 351 Pfam Transcription factor regulating root and shoot growth via Pin3 124 168 IPR013591 -
Aip03g02576 351 Pfam Transcription factor regulating root and shoot growth via Pin3 291 346 IPR013591 -
Aip03g02576 351 MobiDBLite consensus disorder prediction 177 251 - -
Aip03g02576 351 Pfam Transcription factor BRX N-terminal domain 30 56 IPR027988 -
Aip03g02576 351 ProSiteProfiles BRX domain profile. 114 169 IPR013591 -
Aip03g02576 351 MobiDBLite consensus disorder prediction 18 39 - -
Aip03g02576 351 PANTHER PROTEIN BREVIS RADIX-LIKE 4 124 347 - -
Aip03g02576 351 MobiDBLite consensus disorder prediction 90 104 - -
Aip03g02576 351 MobiDBLite consensus disorder prediction 64 104 - -
Aip03g02576 351 MobiDBLite consensus disorder prediction 220 251 - -
Aip03g02576 351 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02576 Aip-Chr3 45839508 45846084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02576 1 347 Major Intrinsic Protein MIP AT1G31880 41.176 8.07e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02576 - - cit:102610534 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03395 01 136964941 136968707 Aip03g02576 03 45839508 45846084 PCT