Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02564 ATGTCTGCATCAGTGAACATCATTGTAGGGTCTCATGTCTGGGTTGAAGATCCCACAGAAGCATGGATTGATGGAGAAGTTTCTAAGATCAGTGGCGAAGAAGTGCATGTTCGCTTGACAAATGGGAAAACGGCTGTCAAAACTATCTCCAAGGTTTTTCCCAAGGATAATGAAGCTCCTCCTGGAGGTGTAGATGACATGACAAAACTCTCATACTTGCATGAGCCAGGAGTTCTACATAACTTGGCAACCAGATACGAACTCAATGAAATCTATACTTATACTGGCAATATCTTGATTGCGGTGAACCCATTTCAAAGGTTACCGCATCTATATGATACACATATGATGGAACAATATAAAGGTGCTACATTTGGAGAGTTGAGTCCCCATGTTTTTGCAGTTGCAGAAGTTGCATACAGGGCGATGATCAATGAAGGAAAAAGTAACTCAATCCTGGTTAGTGGTGAGAGTGGCGCTGGTAAGACAGAGACAACAAAGATGCTTATGCGATATCTTGCTTACCTTGGGGGCCGTTCTGGAGTAGAAGGGCGTACAGTTGAACAACAAGTTCTAGAATCTAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTTAGGAACAATAATTCAAGTCGTTTTGGTAAATTTGTTGAGATCCAATTTGACAACAAGGGAAGGATATCTGGTGCAGCTATAAGAACTTACTTGCTCGAAAGGTCCCGTGTTTGTCAAATCTCAGATCCTGAGAGAAACTACCATTGCTTTTATCTTCTTTGTGCAGCTCCAACTGAGGTAAAAGAGAAGTATAAGTTGGGAAATCCTAGTTCATTCCATTACTTAAATCAATCCAAATGCTATGAACTGGATGGAGTTGATGATACCAATGAGTATATTGCAACTCGTAGGGCAATGGATGTTGTTGGAATCAGTGAGGAAGAGCAAGAGGCAATTTTTAGGGTTGTTGCAGCAATACTGCACCTTGGAAATGTTGAATTTTCAAAAGGAGAGGAGATTGATTCGTCTGTCATCAAAGATGAGAAGTCTAGGTTCCATCTTATTACAACTGCCGAACTTCTCCAGTGTGATGCTAAGAGCTTGGAGGATGCACTGATCAAGCGTGTCATGATAACACCCGAGGAAGTCATTACGAGAACCCTGGATCCTGTTGCAGCTGTTGGTAGCAGGGATGCATTAGCTAAAACCATTTATTCTCGTTTGTTTGATTGGCTTGTGGAGAAGATTAATAATTCAATTGGGCAAGATCCAATTTCAAAGTCTATCATTGGAGTTCTTGATATCTATGGGTTTGAAAGTTTTAAGTTCAATAGTTTTGAGCAGTTCTGTATCAATTTTACTAATGAAAAGCTGCAACAACATTTTAATCAGCATGTCTTTAAAATGGAACAAGAAGAATACAGCAAGGAAGAGATTGACTGGAGCTACATAGAGTTTGTTGACAACCAAGATGTTTTGGATCTAATTGAGAAGAAACCTGGAGGAATAATTGCACTCCTCGATGAGGCCTGTATGTTCCCTAAGTCCACACATGAAACATTTGCTCAGAAGTTGTACCAGACATTCAACAAAAACAAGCGTTTTATCAAACCAAAACTTTCAAGGACTAGTTTTACCATATCTCATTATGCAGGAGAGGTGACATATCTGGCTGATATGTTTCTTGACAAAAACAAGGATTATGTGGTTGCAGAACATCAGGATCTGCTGACAGCCTCAAGATGCTCATTTGTGGCAGGTCTATTCCCCCCTTCTTCACAGGAGTCTTCAAAATCATCCAAGTTCTCCTCAATTGGGTCTCGCTTTAAGCTACAACTTCAGTCATTGATGGAAACCCTAAGTTCAACCGAACCTCACTATATCAGATGTGTGAAGCCAAACAATGTCCTCAAGCCTGCTATTTTTGAAAATCTGAACATTATTCAACAATTACGCTGTGGTGGTGTCCTCGAGGCTATTAGAATCAGCTGTGCAGGATATCCTACTAGACGGACCTTTTATGAGTTTCTTAATCGATTTGGTGTTCTTGCCCCTGAAGTTCTAGATGGAAACTTTGATGACAAGGTTGCATGTCAAAGGATCCTTGATAAAATGGGTATGAAAGGTTATCAGATAGGCAAGACCAAGGTTTTCCTGAGAGCTGGTCAAATGGCCGAGTTGGATGCAAGAAGAGCAGAAGTTCTTGGAAATGCAGCCAGAATCATTCAGAGACAAATAAGAACTCATGTTGCACGGAAGGAATTCTTTGAATTGCGTCAAGCTGCAGTTTGTTTGCAATCTAATTTGCGAGGTATATTGTCTCGGAAGCTATATGAGCAGTTGCGTCGCAACGCAGCAGCTTTGAAAATAGAGAAGAACTTTAAAGGATTCCTTGCCAGGAAATCTTACATAACAGCCCGATCATCCGCAATCACATTGCAGACAGGTTTAAGGGCTATGAAGGCTCGCAAGGAGTTTAGATTTCGGAAGCAAACTAAGGCTGCTATTCTTATCCAGGCTCATTTAAGAGGGCATATTGCACATTCTTACTATAAAGGACTGCAAAAGGCAGCAATTGTTACCCAATGTGGTTGGAGAAGAAGGGTTGCTAGGAGGGAACTTAGAAAGCTTAAAATGGCTGCAAGAGAAACAGGGGCCCTTCAAGATGCAAAGAACAAACTAGAAAAGCGTGTTGAAGAACTCACATGGCGTTTACAAATTGAGAAGCGATTAAGGACTGATTTGGAGGAGGAAAAAGCACAAGACATTGCCAAGTTAAAAGATGCTGTGCGTTCAATGCAAATTCAAGTAGAAGAAGCAAATGCCATGGTCCTCAAAGAGCGTGAGGCAGCTCGGAAAGCCATTGAAGAAGTGCCTCCAGTTATTAAGGAGACTCCTGTTATAATTCAAGATACTCTGAAGATGAATTCCTTGATAGCTGAAGTCAGTAAGTTGAAGGAATCACTGCTATTGGAGAGGAAGGATAAAGAAGAGGCAAGAAAGGCTCAGTCTGAAGCTGAAGCTAGAAACGTCGAGCTGGTTAAGAAAGTTGATGATTACCAGGGCAAGGTGGTTCAACTCCAAGAAATGATTCAAAGGTTGGAGGACAAAATCTCGAATGCAGAATCAGAAAATCAAGTGCTTCGTCAGCAAGCTCTAGCTGCATCTCCAACTGGAAAATCTCTATCTGCAAGATCAAAGACAACAATTATTCAAAGGACACCAGAAAATGGGAAAGCCATAAATGGTGGTGGAAAAATTGGATCGGATTTGACTCTTGTATCAAATATACGTGAACCTGAATCTGAGGGAAAACCACAAAAACATCTAAATGAGAAACAGCAAGAAAACCAGGAGCTGTTGATCAAATGTATCTCACAAGATTTGGGATTTTCTAGGGGCAAACCTGTTGCTGCTTGTCTTATATATAAATGTCTTCTTCACTGGAGATCATTTGAAGCTGAACGAACAAGTGTCTTTGACCGTATCATTCAATCAATTGCTTCAGTTGTTGAGGCTCAGGATGATAATAACATAATAGCATATTGGTTGTCTAATACATCTACTTTGTTGTCACTACTTCAATGCACTCTCAAAGCAAGTGGAGCAGCTAGCTTAACACCCCAACGGCGGAGAACGGCATCGTCTTCTATGTTCGGAAGAATGTCTCAAGGGCTAAGAGCGTCTCCCCAAAGTGCCGTGTCAGTTCAAAATAATAGAGGGGTTGGCAGATTGGATGATTTGCAGCAAGTGGAAGCAAAATATCCAGCACTTCTGTTTAAGCAACAGCTCACTGCTTTCCTGGAAAAAGTATATGGAATGATAAGAGACAATCTGAAAAAAGAGATATCGCCGTTACTTGGATTGTGCATCCAGGCTCCAAGGACCTCACGGCAAAGTTTAGTGAAAGGACGTGCACGTGCTAATGCAGTTGCTCAACAAGCTTTAATTGCTCACTGGCAAAGTATTGTGAACGGCTTAAACAATGCTCTAAAGATAATGAAAGAAAATTATGTGCCCCCTTTCTTGGTCCGTAAGGTGTTCACTCAGATATTCTCTTTCATTAATGTTCAATTATTCAACAGTCTTTTGTTGCGTCGTGAGTGTTGTTCATTCAGCAATGGAGAGTATGTAAAGGCAGGATTGGGTGAATTAGAGAGATGGTGTATTGAGGCCACTGATGAGTATGTTGGCTCAGCCTGGGAGGAACTGAAACATATTGGGCAGGCTGTCGGATTCCTAGTGTTGCATCAGAAACCCAAAAAGACATTTAATGAAGTAACAAAGGAGCTCTGCCCAGTTCTCAGTATACAACAGTTATACAGAATCAGTACTATGTACTGGGACGACAAATACGGCACACATAGTGTGTCTTCAGAAGTTATTACGAACATGAGAGCCATCATGTCTGAGGACACCAACAATGCTGTCAGCAGTTCTTTCCTATTAGATGATGATTCCAGCATTCCATTTTCAGTGGATGACATTTCCAAATCAATGCAGCAAATAGAAGTAGCAGATGTGGAGCCACCTCCAATGATCCGTGATAACTCGGGATTTGGGTTCTTACTGGCACGCTCTAAGTGA 4587 0.412 MSASVNIIVGSHVWVEDPTEAWIDGEVSKISGEEVHVRLTNGKTAVKTISKVFPKDNEAPPGGVDDMTKLSYLHEPGVLHNLATRYELNEIYTYTGNILIAVNPFQRLPHLYDTHMMEQYKGATFGELSPHVFAVAEVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDNKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPTEVKEKYKLGNPSSFHYLNQSKCYELDGVDDTNEYIATRRAMDVVGISEEEQEAIFRVVAAILHLGNVEFSKGEEIDSSVIKDEKSRFHLITTAELLQCDAKSLEDALIKRVMITPEEVITRTLDPVAAVGSRDALAKTIYSRLFDWLVEKINNSIGQDPISKSIIGVLDIYGFESFKFNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYSKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFNKNKRFIKPKLSRTSFTISHYAGEVTYLADMFLDKNKDYVVAEHQDLLTASRCSFVAGLFPPSSQESSKSSKFSSIGSRFKLQLQSLMETLSSTEPHYIRCVKPNNVLKPAIFENLNIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLNRFGVLAPEVLDGNFDDKVACQRILDKMGMKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTHVARKEFFELRQAAVCLQSNLRGILSRKLYEQLRRNAAALKIEKNFKGFLARKSYITARSSAITLQTGLRAMKARKEFRFRKQTKAAILIQAHLRGHIAHSYYKGLQKAAIVTQCGWRRRVARRELRKLKMAARETGALQDAKNKLEKRVEELTWRLQIEKRLRTDLEEEKAQDIAKLKDAVRSMQIQVEEANAMVLKEREAARKAIEEVPPVIKETPVIIQDTLKMNSLIAEVSKLKESLLLERKDKEEARKAQSEAEARNVELVKKVDDYQGKVVQLQEMIQRLEDKISNAESENQVLRQQALAASPTGKSLSARSKTTIIQRTPENGKAINGGGKIGSDLTLVSNIREPESEGKPQKHLNEKQQENQELLIKCISQDLGFSRGKPVAACLIYKCLLHWRSFEAERTSVFDRIIQSIASVVEAQDDNNIIAYWLSNTSTLLSLLQCTLKASGAASLTPQRRRTASSSMFGRMSQGLRASPQSAVSVQNNRGVGRLDDLQQVEAKYPALLFKQQLTAFLEKVYGMIRDNLKKEISPLLGLCIQAPRTSRQSLVKGRARANAVAQQALIAHWQSIVNGLNNALKIMKENYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLGELERWCIEATDEYVGSAWEELKHIGQAVGFLVLHQKPKKTFNEVTKELCPVLSIQQLYRISTMYWDDKYGTHSVSSEVITNMRAIMSEDTNNAVSSSFLLDDDSSIPFSVDDISKSMQQIEVADVEPPPMIRDNSGFGFLLARSK 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02564 1528 Gene3D Myosin VI head, motor domain, U50 subdomain 312 601 - -
Aip03g02564 1528 Coils Coil 994 1051 - -
Aip03g02564 1528 Pfam IQ calmodulin-binding motif 759 778 IPR000048 GO:0005515
Aip03g02564 1528 Pfam IQ calmodulin-binding motif 737 755 IPR000048 GO:0005515
Aip03g02564 1528 Pfam IQ calmodulin-binding motif 807 827 IPR000048 GO:0005515
Aip03g02564 1528 Pfam IQ calmodulin-binding motif 856 875 IPR000048 GO:0005515
Aip03g02564 1528 Pfam IQ calmodulin-binding motif 832 852 IPR000048 GO:0005515
Aip03g02564 1528 CDD MYSc_Myo11 76 720 IPR036018 -
Aip03g02564 1528 ProSiteProfiles Dilute domain profile. 1161 1471 IPR002710 -
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 806 835 IPR000048 GO:0005515
Aip03g02564 1528 Gene3D - 735 784 - -
Aip03g02564 1528 Gene3D - 785 832 - -
Aip03g02564 1528 Gene3D - 833 882 - -
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 783 812 IPR000048 GO:0005515
Aip03g02564 1528 Coils Coil 877 918 - -
Aip03g02564 1528 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 PRINTS Myosin heavy chain signature 482 510 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 785 IPR027417 -
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 758 787 IPR000048 GO:0005515
Aip03g02564 1528 Pfam DIL domain 1347 1450 IPR002710 -
Aip03g02564 1528 Pfam Myosin N-terminal SH3-like domain 9 44 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 CDD MyosinXI_CBD 1112 1494 IPR037975 GO:0007015
Aip03g02564 1528 SMART iq_5 853 875 IPR000048 GO:0005515
Aip03g02564 1528 SMART iq_5 734 756 IPR000048 GO:0005515
Aip03g02564 1528 SMART iq_5 757 779 IPR000048 GO:0005515
Aip03g02564 1528 SMART iq_5 782 804 IPR000048 GO:0005515
Aip03g02564 1528 SMART iq_5 830 852 IPR000048 GO:0005515
Aip03g02564 1528 SMART iq_5 805 827 IPR000048 GO:0005515
Aip03g02564 1528 Coils Coil 923 957 - -
Aip03g02564 1528 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 854 883 IPR000048 GO:0005515
Aip03g02564 1528 Pfam Myosin head (motor domain) 64 720 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 Gene3D - 439 623 - -
Aip03g02564 1528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 785 883 IPR027417 -
Aip03g02564 1528 Gene3D - 667 733 - -
Aip03g02564 1528 Gene3D Kinesin motor domain 65 662 IPR036961 -
Aip03g02564 1528 PANTHER MYOSIN-5 6 1525 - -
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 737 761 IPR000048 GO:0005515
Aip03g02564 1528 ProSiteProfiles IQ motif profile. 831 857 IPR000048 GO:0005515
Aip03g02564 1528 SUPERFAMILY PspA lactotransferrin-binding region 973 1049 - -
Aip03g02564 1528 ProSiteProfiles Myosin motor domain profile. 62 732 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 SMART DIL_2 1346 1453 IPR002710 -
Aip03g02564 1528 PANTHER MYOSIN 6 1525 - -
Aip03g02564 1528 SMART MYSc_2a 56 733 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip03g02564 1528 Gene3D - 252 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02564 Aip-Chr3 45431222 45447180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02564 67 1526 Myosins gene family AT5G20490 80.356 0.0 2448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02564 K10357 - gmx:100777802 2664.8