Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02559 ATGGAGGAAATTACTTCGACGATTGCAGTGCCATACAGACTTGGGAATTTGATTCAGAAGGAGTCAACGGTGGCAACCCGCATGGAGATAACTGGTCTGAAGCTCATGGCAAACACAACAGCTTTGATATTAAATCCTACAATTGAAGCTCATCATCAATCTTACTCTGTTGGAAACGAAGACTACTGCACAGATATATGTCCAAAACACCAAACTAGGTCATCTGCAGAGGTAAAGGAGAATCAGGGTCGAACCAACTCAGCTCCCCTTGAATCAGAAATGGTTACTGAATTTAAGGTGAAAGATGAATTCATGTCAGCTAACAGTTTTCATTCTGTACATAATCAAAGATCTGAATCTGTTGCCAGTGACAAAAGTTGTCCTGGGAATGAAGCTGCTACTTTGACTGATAATTGTTCTGATTCTGATAATGATTTGCTAATTGCCACCAAGTTTAATAGTAATATCCAAGGAAAGTCCAGTTCGATCGAGGCGAGTGCAGAGCTGGAGCCAATGCAGAACATGGTTTCTGCTGCTATGGAACTTGAAACTGAAGATGGAAGCGGATCAGATGGATTTGATCCAAAACTATCTGCCAGTCTCCATGATGTGTCAGACAAGCAAACAAGCATAGCAGACTTCCAGAATGCATCGGAATCTGATGGAGGTCCTCGTTGGGGTTTCTCATCAGTTTGTGGAAGGAGACAAGAGATGGAAGATGCTGTTGCTTGTCAGCCTCAACTTCTTCAAGTTCCTTCACAGATGCTAGCAGATGACCACGTTAATGAAAATGGAAACTCATCAGCCCACTTTTTCGGTGTCTATGATGGACATGGGGGTTGTCAGGTTGCGAATTACTGCCGGGAACATCTTCATTCAGTGTTGACTGAGGAGATAGAAGCTGCAAAATCTAGTTTAAACAATGCCAGGGAGAAGTGGCAAGAACATTGGAAGAAAGCATTCTCTAATTGTTTTCATAAAGTAGATGATGCAGTTGGACGAATCGGGGCACCGGATAGTGAAAGCCATTGTGATGGATCTGAGGGTAGTATTGAACCCCTTACTCCTGAGACTGCAGGCTCTACTGCAGTGGTTGCTATTCTAACTCAAACCTACATTATAGTCGCAAATTGTGGTGATTCAAGAGCAGTTCTATGTCGCGGAAAAGAAGCCATGCCTTTGTCTACTGACCACAAACCTAATAGAGAAGATGAATGGGAAAGGATAGAAGCTGCTGGAGGAAGGGTCATACAGTGGAATGGTTACCGAGTTCTTGGTGTTTTGGCAGTGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGGATAATTCCAGAACCAGAAGTCATGTTTATTCGAAGACAGAAAACCGACGAGTGCCTTATTCTCGCCAGTGACGGTCTATGGGATGTCATCACAAACGAAGAAGCCTGCGCCATTGCGCGAAAACGAATCCTCCTTTGGCATAAGAAGAATGGCAGCAACAACAACAACAATATCAGTGTATCAACAGAACATGGCCATGGCATTGATCCTGCAGCTCATTATGCTGCAGAATGTCTATCTAAACTCGCCATCCAAAGGGGAAGCAAAGATAATGTCTCAGTCATTGTTATAGACCTAAAGGCCCAAAGAAAATTGAAGAAGAAAGCATAG 1656 0.4318 MEEITSTIAVPYRLGNLIQKESTVATRMEITGLKLMANTTALILNPTIEAHHQSYSVGNEDYCTDICPKHQTRSSAEVKENQGRTNSAPLESEMVTEFKVKDEFMSANSFHSVHNQRSESVASDKSCPGNEAATLTDNCSDSDNDLLIATKFNSNIQGKSSSIEASAELEPMQNMVSAAMELETEDGSGSDGFDPKLSASLHDVSDKQTSIADFQNASESDGGPRWGFSSVCGRRQEMEDAVACQPQLLQVPSQMLADDHVNENGNSSAHFFGVYDGHGGCQVANYCREHLHSVLTEEIEAAKSSLNNAREKWQEHWKKAFSNCFHKVDDAVGRIGAPDSESHCDGSEGSIEPLTPETAGSTAVVAILTQTYIIVANCGDSRAVLCRGKEAMPLSTDHKPNREDEWERIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWIIPEPEVMFIRRQKTDECLILASDGLWDVITNEEACAIARKRILLWHKKNGSNNNNNISVSTEHGHGIDPAAHYAAECLSKLAIQRGSKDNVSVIVIDLKAQRKLKKKA 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02559 551 CDD PP2Cc 225 541 IPR001932 -
Aip03g02559 551 SMART PP2C_4 215 539 IPR001932 -
Aip03g02559 551 ProSiteProfiles PPM-type phosphatase domain profile. 225 541 IPR001932 -
Aip03g02559 551 Pfam Protein phosphatase 2C 227 534 IPR001932 -
Aip03g02559 551 ProSitePatterns PPM-type phosphatase domain signature. 271 279 IPR000222 GO:0043169
Aip03g02559 551 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 143 550 - -
Aip03g02559 551 PANTHER ALPHABET, ISOFORM E-RELATED 143 550 - -
Aip03g02559 551 Coils Coil 292 312 - -
Aip03g02559 551 Gene3D - 214 551 IPR036457 -
Aip03g02559 551 SUPERFAMILY PP2C-like 224 542 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02559 Aip-Chr3 45132994 45135097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02559 224 550 PP2C-type Phosphatase Gene Family AT4G26080 59.633 1.97e-134 396
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02559 K14497 - gmx:100812974 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip01g03381 01 136866211 136869547 Aip03g02559 03 45132994 45135097 PCT