Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02557 ATGGAGATAAATGATCATCGAGAAGATGAAAGGGAAGGGAAGGTGAAAGAAGCCATGGCAGTTGACGACGACGAAGAAAAAGAAGATGACGACGAGAAAGAAGAAGAGGAAGAGGAAGAGGAAGAAGGAACCACAGGTTCGAGTTTGACCATGGAGAGGGTTGCTGTAGCTAAGGAATTCATTGAAAACCATTACAAGGCTCATATGAAACATATCCAAGATCGCAAAGAAAGGCGTTTAGTACTAGAAAAGAAGCTAGCATCTTCTCATGTACCAGAAGAGGAACAAATCAATCTATTAAAAGATTTAGAGCGAAAGGAGACTGAGTATATACGATTAAAAAGAAACAAAATATGTGTTGATGATTTTGACCTTCTAACAATTATTGGCAGAGGAGCCTTTGGCGAGGTAAGACTCTGTCGGGAAAAGAAATCAGGTCACATATACGCCATGAAAAAGTTGAAGAAGTCTGAAATGCTTCGTAGGGGACAGGTTGAGCATGTTAGAGCGGAAAGGAATGTACTTGCAGAAGTTGCAAGTGAGTGCATTGTGAAGCTGTATTACTCTTTTCAAGATGATGAATACTTATATCTAATAATGGAGTATTTACCTGGTGGTGATATAATGACTTTGCTTATGAGAGAGGAAATTTTGACCGAAACTATGGCGAGATTTTACATTGCGCAAACTGTTTTGGCAATAGAGTCTATTCATAAACACAATTACATTCATCGAGACATAAAACCTGACAACCTTCTATTGGACAAAAATGGTCATATGAAGCTCTCTGATTTTGGTCTTTGCAAGCCACTTGACTGTTCTAATTTATCATCTATAAATGAAAATGAAGTTCTAGATGATGAGAACTTGAATGATACCATGGACATTGATGGATCCAACCCAAATAAAAGAAATGGAAGGCGCTGGAAAAGTCCCCTTGAACAACTTCAACATTGGCAAATGAATCGGAGGAAGTTGGCATTTTCCATGGTTGGTACTCCGGACTATATTTCTCCCGAGGTGCTTCTAAAAAAAGGCTATGGTGCAGAATGTGACTGGTGGTCTCTTGGTGCTATATTGTATGAGATGCTTATTGGTTATCCTCCATTTTATTCTGATGATCCTATAACAACATGTAGAAAGATTGTGCATTGGAAAAATCACTTAAAATTTCCAGTTGAGATAAGGTTGAGTCCAGAAGCAAGAGATCTAATATGTAGGTTACTTGTTGATGCTCCACAAAGGCTTGGTACTAATGGAGCATATGAAATTAAAACTCATCCTTGGTTCAAAAATGTTGAATGGGATAGGCTTTATGAAATGGAGGCAGCATTTATACCACAGGTCGATGGAGAGCTTGACACTCAAAATTTTATGAAATTTAATGAGGTTGAAGCAGAACAACCAAAACCAACTAGAAGTGCATCAGGACCGATCAGAAAAAAGTTGTTAACTCCTCAAGATCTCAGTTTTGTTGGCTATACATATAAGAATTTTGCTGCTGTTAAGGGAACACGCCATTCTATTGATATGTTGTCTTTGTCAACCCCACAGCGCACATCATCCATTGACTCTACACAAAGTGATACTGCAATTGACTATTCCACATGA 1611 0.3836 MEINDHREDEREGKVKEAMAVDDDEEKEDDDEKEEEEEEEEEGTTGSSLTMERVAVAKEFIENHYKAHMKHIQDRKERRLVLEKKLASSHVPEEEQINLLKDLERKETEYIRLKRNKICVDDFDLLTIIGRGAFGEVRLCREKKSGHIYAMKKLKKSEMLRRGQVEHVRAERNVLAEVASECIVKLYYSFQDDEYLYLIMEYLPGGDIMTLLMREEILTETMARFYIAQTVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSSINENEVLDDENLNDTMDIDGSNPNKRNGRRWKSPLEQLQHWQMNRRKLAFSMVGTPDYISPEVLLKKGYGAECDWWSLGAILYEMLIGYPPFYSDDPITTCRKIVHWKNHLKFPVEIRLSPEARDLICRLLVDAPQRLGTNGAYEIKTHPWFKNVEWDRLYEMEAAFIPQVDGELDTQNFMKFNEVEAEQPKPTRSASGPIRKKLLTPQDLSFVGYTYKNFAAVKGTRHSIDMLSLSTPQRTSSIDSTQSDTAIDYST 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02557 536 Coils Coil 21 41 - -
Aip03g02557 536 MobiDBLite consensus disorder prediction 1 52 - -
Aip03g02557 536 PANTHER SERINE/THREONINE-PROTEIN KINASE 41 535 - -
Aip03g02557 536 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Aip03g02557 536 ProSiteProfiles AGC-kinase C-terminal domain profile. 431 506 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip03g02557 536 Gene3D Phosphorylase Kinase; domain 1 449 459 - -
Aip03g02557 536 SMART pkinase_C_6 431 498 IPR000961 GO:0004674|GO:0005524|GO:0006468
Aip03g02557 536 Gene3D Transferase(Phosphotransferase) domain 1 325 448 - -
Aip03g02557 536 Gene3D Transferase(Phosphotransferase) domain 1 207 272 - -
Aip03g02557 536 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 41 535 - -
Aip03g02557 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Aip03g02557 536 MobiDBLite consensus disorder prediction 516 536 - -
Aip03g02557 536 MobiDBLite consensus disorder prediction 22 45 - -
Aip03g02557 536 SMART serkin_6 123 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02557 536 Gene3D Phosphorylase Kinase; domain 1 121 206 - -
Aip03g02557 536 MobiDBLite consensus disorder prediction 1 21 - -
Aip03g02557 536 ProSiteProfiles Protein kinase domain profile. 123 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02557 536 SUPERFAMILY Protein kinase-like (PK-like) 120 476 IPR011009 -
Aip03g02557 536 CDD STKc_NDR_like 121 497 - -
Aip03g02557 536 Pfam Protein kinase domain 125 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02557 536 Pfam Protein kinase domain 321 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02557 Aip-Chr3 45043885 45055338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02557 34 535 AGC Kinase Gene Family AT2G19400 73.016 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Aip03g02557 Pkinase 7.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02557 K08790 - gmx:100802177 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02557 03 45043885 45055338 Aip03g02557 03 45043885 45055338 ECH