Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02496 ATGTGGAACTCTGCAGATAATGCGTTTGCGCGATCGGCGTCGTTTCGGAAGGAAGGGGAGGATGAGGAGGCACTGCGGTGGGCCGCGCTTGAGAGGCTCCCTACCTACAGGCGAGCACGGAGGGGGATCTTTAAGAATCTCGGTGGCGATAAGAGGGAGGTCGACGTCGCAGACCTTGGCGCACAGGAGCATCGGATCCTTCTCGAGAGGCTCGCCGATGCACTCGACGACGATCCTGAGACGTTCTTTCAGCGCATGAGAAACCGATTCGATGCAGTAGATTTGGAGTTTCCAAAGATTGAAGTTCGGTTTCAAAACTTGACGGTAGAGACTTTTGTCCATGTAGGAAGCAGAGCATTGCCTACAATTTCCAATTTCATTTGCAATATGAGTGAGGTTTTTTTACGGCAAATGAGGATTTTAAGAAGGAAGAGAAGCAAATTGACCATTCTTGCTGATATCAGTGGGATTATAAGGCCTTCAAGACTAACGCTGCTGTTGGGTCCACCAAGCTCTGGAAAAACGACACTTCTATTAGCTCTTGCTGGTAGGCTGGGACCTGGTTTACAGATGTCAGGGAACATTACGTACAATGGACATGGTTTGAATGAGTTTGTTCCTCAAAGAACGTCTGCTTATGTCAGTCAACAAGATTGGCAAGTGGCAGAGATGACCGTGAGGGAAACTCTCCAGTTTGCAGGCCGCTGTCAAGGCGTCGGATTTAAATTTGATATGCTGCTAGAGCTTGCAAGGAGAGAAAAGAGTGCTGGAATAAAACCAGATGTTGATCTTGATATCTTCATGAAGTCAATAGCTCTTGGAGGACAGGAAACAGATCTTGTGGTAGAGTACATCATAAAGATATTAGGTTTGGACATATGTGGAGACACATTGGTGGGCGATGAAATGCTCAAAGGCATCTCAGGGGGACAAAAGAAACGACTTACAACAGGAGAGTTACTAATTGGTCCAGCAAGAGTTCTGTACATGGACGAGATATCAACCGGCCTCGATAGTGCAACCACTTACCAAATCATTAGATATCTTAAACATTCTACCCGTGCACTTGATACAACCACTATCATATCTCTTCTTCAACCAGCTCCTGAGACCTATGAATTGTTTGATGATGTCATTCTATTGTGCGAGGGTCAGATTGTTTATCAAGGGCCCCGTGAATCTGCTCTTGAATTTTTCAAAATGATGGGGTTCACTTGTCCTGAGCGAAAGAATGTAGCAGATTTCTTACAAGAAGTTACGTCAAAGAAGGACCAGGAGCAATACTGGTCCGTTCTCGACCAGCCTTATCGGTACATACCTGTTGGCAAGTTTGCCGAAGCGTTTTCATTGTATCGCGAAGGAAAGAACTTATCAGAGGAACTAAGTGCTCCTTTCGATAAACGCTACAATCATCCCGCAGCCTTGGCTACTTGTACCTATGGCGCCACGAGGCTTGACCTTCTCAGGACAAATTACCAGTGGCAGAAGCTTCTTATGAAACGGAATTCATTCATTTATGTTTTCAAATTTGTTCAGCTGTTTTTGGTTGCTTTAATTACAATGAGTGTATTTTTCCGGACAACGATGCACCATAATACAATTGACGACGGGGGATTATATCTTGGTTCACTGTACTTTTCTATGGTTATTATTCTCTTCAATGGTTTTACGGAGGTGTCAATGTTGGTTGCAAAGCTTCCAGTTCTGTACAAGCATAGAGATTTGCACTTCTATCCTAGCTGGGCATATACAATCCCTTCTTGGTTCCTTAGCATCCCAACTTCTCTCATGGAAGCTGGTTGCTGGGTTGCTGTCTCTTACTATACAATTGGATATGATCCTTCAATTATCAGATTTTTTCGGCAATTCTTGCTTTATTTCTTTCTGCACCAGATGTCGCTAGGCCTATTTCGTCTGATAGGATCCTTGGGGCGGAACATGATAGTGGCCAATACTTTTGGATCCTTTGCCATGTTGATTGTGATGGCTCTTGGCGGATACATCATTTCAAGAGATCGCATTCCAAGTTGGTGGATATGGGTACAAAATCAGGTCACCAACTATCCCTTGGGTAAGCTAGTGTTGAAACAGCGAAGTTTGTATCAAGAGAGCTATTGGTATTGGATTGGTCTTGGAGCAATGGTTGGATATACAATTTTGTTCAACACATTATTTACTATCTTCTTAGCTTACCTTAATCCTTTGGGAAAACAACAAGCTGTAGTTTCAAAGAGTGAGCTACAAGAAAGAGAAAAGAGAAGGAAAGGTGAAAGCGTTATTGTTGAGTTGAGAGAGTACTTGCAGCATTCAGCATCCAGTGGAAAGCATTTCAAACAAAGAGGAATGGTTCTCCCATTTCAACCTCTTTCCATGGCTTTCAGCAATATCAATTACTATGTGGATGTCCCTTTGGAATTGAAACAACAAGGGATACAAGAAGAAAGGCTGCAGCTGCTTGTTAATGTTACTGGAGCTTTTAGGCCTGGAGTGTTGACAGCATTGGTTGGAGTAAGCGGGGCTGGAAAAACCACGCTAATGGATGTCTTGGCTGGAAGAAAAACTGGAGGTGTTATAGAAGGGAACATATACATATCTGGTTATCCCAAAAGGCAAGACAGTTTTGCAAGAATTTCCGGTTATTGTGAGCAGACAGATGTTCATTCCCCTTGCTTGACTGTCTGGGAGTCATTATTGTTCTCTGCTTGGCTCCGGTTATCTTCAGATGTTGACTTTGAAACACAAAAGGCCTTTGTTGAGGAGGTAATGGAACTGGTGGAACTCACTCCATTGAAAGGGGCACTAGTTGGTCTACCTGGAATTGATGGCTTGTCAACAGAACAACGAAAAAGATTAACAATAGCAGTTGAACTGGTTGCAAACCCATCTATAGTTTTCATGGATGAGCCCACTTCTGGATTGGATGCCAGGGCTGCAGCCATTGTAATGAGAACTGTTAGAAATATAGTGAATACTGGCCGAACGATCGTGTGCACAATCCATCAGCCTAGCATAGACATATTTGAATCGTTTGATGAGCTTCTGTTTATGAAGCGTGGAGGAGAGCTCATATATGCTGGTCCACTTGGCCCTAAATCTAGTGAACTTATCAATTATTTCGAGGCAGTGGAAGGGGTTTCGAAGATCAGGTCCGGATATAACCCTGCAACATGGATGTTGGAGGTTACTTCTTCAACAGAAGAAAACCGTTTGGGAGTGGACTTTGCAGAAATATACCGAAGATCAAGTTTATACCAGTATAATAAAGAATTGGTTGAAAGCTTGAGCAAGCCGAGCAATAATTCAAAAGAGTTGCATTTTCCAACCAAGTATTGTCGGTCATATTTTGATCAGTTTCTAACTTGTCTTTGGAAGCAAAATCTATCTTACTGGCGTAACCCACACTACACTGCTGTTCGCTTCTTTTACACTGTCATCATCTCCTTGATGCTTGGGACAATATGCTGGAGATTTGGTGCTAAAAGAGACATGCAGCAAGATCTATTCAATGCCATGGGATCCATGTATTCTGCAATCCTCTTCATTGGCATAACAAATGGCACAGCCGTTCAACCTGTTGTTTCGGTTGAAAGATTTGTTTCATATAGAGAAAGAGCTGCTGGGATGTATTCGGCCTTACCATTTGCTTTTGCTCAGGTTATTATTGAGTTTCCTTATGTGTTCGCACAGGCTATGATATACTCCACAATTTTCTATTCTATGGCTTCCTTTGTCTGGAGTGTTGATAGGTTCATATGGTACTTGTTCTTCATGTATGTTACTATGCTGTATTTTACCTTCTATGGAATGATGACAACGGCTGTCACACCAAATCATAATGTTGCTGCCATTATCGCTGCTCCATTTTATATGTTATGGAACCTTTTCAGTGGTTTTATGATTCCTCATAAGAGAATCCCTGTTTGGTGGAGATGGTATTACTGGGCAAACCCTGTAGCCTGGAGTCTTTATGGTCTCCTGACTTCACAGTATGGTGGTGATGAAAAATCTGTGAAGCTATCTAATGGGAATTCCATGGCTATTTCGCAAGTACTCAGAGTGGTGTTTGGGTACAGGCATGATTTCTTGTGCGTTGCCGCTGTTATGGTTGCTGGCTTCTGCGTATTTTTTGCAATAATATTTGCCTTTGCAATTAAATCCTTCAATTTCCAAAGGAGATGA 4179 0.4274 MWNSADNAFARSASFRKEGEDEEALRWAALERLPTYRRARRGIFKNLGGDKREVDVADLGAQEHRILLERLADALDDDPETFFQRMRNRFDAVDLEFPKIEVRFQNLTVETFVHVGSRALPTISNFICNMSEVFLRQMRILRRKRSKLTILADISGIIRPSRLTLLLGPPSSGKTTLLLALAGRLGPGLQMSGNITYNGHGLNEFVPQRTSAYVSQQDWQVAEMTVRETLQFAGRCQGVGFKFDMLLELARREKSAGIKPDVDLDIFMKSIALGGQETDLVVEYIIKILGLDICGDTLVGDEMLKGISGGQKKRLTTGELLIGPARVLYMDEISTGLDSATTYQIIRYLKHSTRALDTTTIISLLQPAPETYELFDDVILLCEGQIVYQGPRESALEFFKMMGFTCPERKNVADFLQEVTSKKDQEQYWSVLDQPYRYIPVGKFAEAFSLYREGKNLSEELSAPFDKRYNHPAALATCTYGATRLDLLRTNYQWQKLLMKRNSFIYVFKFVQLFLVALITMSVFFRTTMHHNTIDDGGLYLGSLYFSMVIILFNGFTEVSMLVAKLPVLYKHRDLHFYPSWAYTIPSWFLSIPTSLMEAGCWVAVSYYTIGYDPSIIRFFRQFLLYFFLHQMSLGLFRLIGSLGRNMIVANTFGSFAMLIVMALGGYIISRDRIPSWWIWVQNQVTNYPLGKLVLKQRSLYQESYWYWIGLGAMVGYTILFNTLFTIFLAYLNPLGKQQAVVSKSELQEREKRRKGESVIVELREYLQHSASSGKHFKQRGMVLPFQPLSMAFSNINYYVDVPLELKQQGIQEERLQLLVNVTGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGVIEGNIYISGYPKRQDSFARISGYCEQTDVHSPCLTVWESLLFSAWLRLSSDVDFETQKAFVEEVMELVELTPLKGALVGLPGIDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGPKSSELINYFEAVEGVSKIRSGYNPATWMLEVTSSTEENRLGVDFAEIYRRSSLYQYNKELVESLSKPSNNSKELHFPTKYCRSYFDQFLTCLWKQNLSYWRNPHYTAVRFFYTVIISLMLGTICWRFGAKRDMQQDLFNAMGSMYSAILFIGITNGTAVQPVVSVERFVSYRERAAGMYSALPFAFAQVIIEFPYVFAQAMIYSTIFYSMASFVWSVDRFIWYLFFMYVTMLYFTFYGMMTTAVTPNHNVAAIIAAPFYMLWNLFSGFMIPHKRIPVWWRWYYWANPVAWSLYGLLTSQYGGDEKSVKLSNGNSMAISQVLRVVFGYRHDFLCVAAVMVAGFCVFFAIIFAFAIKSFNFQRR 1392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02496 1392 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 791 1044 IPR003439 GO:0005524
Aip03g02496 1392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 805 1027 IPR027417 -
Aip03g02496 1392 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 135 408 IPR003439 GO:0005524
Aip03g02496 1392 Pfam ABC transporter 152 333 IPR003439 GO:0005524
Aip03g02496 1392 SMART AAA_5 828 1020 IPR003593 -
Aip03g02496 1392 SMART AAA_5 160 385 IPR003593 -
Aip03g02496 1392 Pfam ABC-2 type transporter 490 682 IPR013525 GO:0016020|GO:0140359
Aip03g02496 1392 Pfam ABC-2 type transporter 1117 1329 IPR013525 GO:0016020|GO:0140359
Aip03g02496 1392 Gene3D - 804 1035 IPR027417 -
Aip03g02496 1392 Pfam ABC-transporter N-terminal 76 126 IPR029481 -
Aip03g02496 1392 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 409 IPR027417 -
Aip03g02496 1392 Pfam Plant PDR ABC transporter associated 684 742 IPR013581 -
Aip03g02496 1392 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1392 - -
Aip03g02496 1392 CDD ABCG_PDR_domain2 788 1026 IPR034003 -
Aip03g02496 1392 Pfam ABC-2 type transporter 366 419 IPR043926 GO:0140359
Aip03g02496 1392 Gene3D - 136 434 IPR027417 -
Aip03g02496 1392 PANTHER ABC TRANSPORTER G FAMILY MEMBER 32 9 1392 - -
Aip03g02496 1392 Pfam ABC transporter 820 971 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02496 Aip-Chr3 42442591 42452045 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02496 816 1003 Calmodulin-binding Proteins AT2G36910 25.521 1.72e-06 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02496 K08711 - gmx:100815410 2501.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip03g02496 03 42442591 42452045 Aip03g02496 03 42442591 42452045 ECH