Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02484 ATGGTCCCTTTGGATAAATTGGCCTGGGCACGTGGTGACCGCTCTTATTTTCAGGCACAAATGTCAGAGGAGGAAGATTGCTCTTCTTCTTGTTTGAAAGATTGCAATTGTTGGGCTGCTTCTTATGATCAGAATAGCATGATTTGTACAAAGCAGCAACCCCCTCTCAGATATGCAAAAAGGATACAGGGAAACGAAGAAGTACCCTCCTTGAAATTCTTCAAGGTAAGAAACTTGAACTTGAATAATGTTAGCAGTGAGCCTGTCCCTGAGATTCTTGGAACAATCAATTCATCAAGACTACTAGTAACAAAGCAATTCTACATTCGAGTTCTCAAGTACAAAAGGCTCTTGGAGATTGGGGACTTGGGGCTGAATGAGGAAGTGGCTTTGAGGAGATTTTCATACACTGAGCTCAAGAGAGCAACCAACGGTTTCAAACAAGAGTTGGGAAAGGGCTCTTTTGGAGCAGTTTACAAAGGGGTTTTATACAAGGCGGGAAGATGTAGGAGATTCATTGCGGTGAAGAGACTTGAGAAGTTGGTTGAAGATGGAGAAAGAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTCTGTGCCGAGGGTCCCAAAAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCAGATTGGGATGAAAGAGTCAGAATAGCTCTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGTGAGGCACCCATCATTCACTGCGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCTGATTTCGGGCTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACCTTCACAGGAGTTAGAGGGACAAGAGGGTACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAGACAGTGTGTTGCAGGAGAAACCTTGATGTTAATGTGTCAGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCCTATAAGTGCTTTGTTGCTGGAGAGGTGCACAAGCTAGTTCATTGGGAAGAAGTGGATAAGAATGTTGTGGAAAATATGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTGTTCTCCGGCCTTCAATGAAGAGTGTGGTGCTCATGCTTGAAGGGGTTACTGATGTGCCAGTTCCTCCTTGCCCAACTTCTAATTCCATGTGA 1296 0.4468 MVPLDKLAWARGDRSYFQAQMSEEEDCSSSCLKDCNCWAASYDQNSMICTKQQPPLRYAKRIQGNEEVPSLKFFKVRNLNLNNVSSEPVPEILGTINSSRLLVTKQFYIRVLKYKRLLEIGDLGLNEEVALRRFSYTELKRATNGFKQELGKGSFGAVYKGVLYKAGRCRRFIAVKRLEKLVEDGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGDERLPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRNLDVNVSEPNEILLSGWAYKCFVAGEVHKLVHWEEVDKNVVENMVKVALWCIQDEPVLRPSMKSVVLMLEGVTDVPVPPCPTSNSM 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02484 431 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 429 IPR045874 GO:0004672
Aip03g02484 431 Pfam Protein kinase domain 147 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02484 431 Gene3D Phosphorylase Kinase; domain 1 117 223 - -
Aip03g02484 431 Gene3D Transferase(Phosphotransferase) domain 1 224 423 - -
Aip03g02484 431 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 5 429 - -
Aip03g02484 431 SMART serkin_6 144 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02484 431 SUPERFAMILY Protein kinase-like (PK-like) 130 415 IPR011009 -
Aip03g02484 431 ProSitePatterns Protein kinases ATP-binding region signature. 150 176 IPR017441 GO:0005524
Aip03g02484 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 267 279 IPR008271 GO:0004672|GO:0006468
Aip03g02484 431 ProSiteProfiles Protein kinase domain profile. 144 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02484 Aip-Chr3 42263478 42264850 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02484 125 420 Receptor kinase-like Gene Family AT1G56120 45.515 2.29e-68 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02484 Pkinase 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02484 - - aip:107633068 779.245