Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02483 ATGCCCATTCGAAATCTTTTTGTTGCTGCTGAGAATGAGAACAAGAACAAGAACAGGAACACAATTATTTATCGTGCAACTCTGGATTTTGATGGAGTTTTTCGACTCTATTCTCATGACATGGCTAACAAAGTCATCAGCATAGTAAAAACCTGGCCTGATAATGCTTGTTCTGTGAAGGGCTTCTGCGGCTTCAACAGTTACTGTGCACTGGCTGATGAGAATCCTTTTTGCTATTGTCTTCCGGGATTTGATTACCTTGATCCGAACCAGAACACTCTTGGCTGCAAAAGAAACTCCTCAGAAGACAAGTGTAGTGAGGAAGAGTTTTACAGAATGGTTTCTTTGGATAAATTGGCCTGGGATGGCGACCGGTCTTATTTTCAGGCACAGATGGCAGATGAGGAACATTGCTCTTCTTCTTGTTTGAAAGATTGCAATTGTTGGGCTGCTTCTTATGATCAGAGTACCAAGATTTATATGAAGCAGCAAACCCCTCTCAGATATGCAAGAAGGGTACAGTTGAACGAAAAAGTACCCTCCTTGAAATTCTTCAAGGTAGGAAACTTGAACTTGAATCATGTTAGTAGTGAGCCTGTCCCTGAGACTCCACTTTCTCATAAGATCATCAAGACTACTAGTAACAAAGCAATTCTACGTATTATTCTTGTTACCTCCATTTTCACTCTGATTTTCTGCTCCACTATTGGGATATCTTGTCATTTGATGTCGAAGATTCGAGTTCTCAAGTACAAAAGGCTCTTGGAGATTGGGGACTTGGGGCTGAATGAGGAAGTGGCTTTGAGGAGATTTTCATACACTGAGCTCAAGAGAGCAACCAACGGTTTCAAACAAGAGTTGGGAAAGGGCTCTTTTGGAGCAGTTTACAAAGGGGTTTTATACAAGGCGGGAAGATGTAGGAGATTCATTGCGGTGAAGAGACTTGAGAAGTTGGTTGAAGATGGAGAAAGAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTCTGTGCCGAGGGTCCCAAAAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCAGATTGGGATGAAAGAGTCAGAATAGCTCTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGTGAGGCACCCATCATTCACTGCGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCCGATTTCGGGCTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACTTTCACAGGGGTTAGAGGGACAAGAGGATACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAGACAGTGTGTTGCAGGAGAAACCTTGATGCTAATGTGTCAGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCCTATAAGTGCTTTGTTGCTGGAGAGGTGCATAAGCTAGTTCATTGGGAAGAAGTGGATAAGAATGTCGTGGAAAATACGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTGTTCTCCGGCCTTCAATGAAGAGTGTTGTGCTCATGCTTGAAGGGGTTACTCATGTGCCAATGCCTCCTTGCCCAACTTCTAATTCCATGTGA 1707 0.437 MPIRNLFVAAENENKNKNRNTIIYRATLDFDGVFRLYSHDMANKVISIVKTWPDNACSVKGFCGFNSYCALADENPFCYCLPGFDYLDPNQNTLGCKRNSSEDKCSEEEFYRMVSLDKLAWDGDRSYFQAQMADEEHCSSSCLKDCNCWAASYDQSTKIYMKQQTPLRYARRVQLNEKVPSLKFFKVGNLNLNHVSSEPVPETPLSHKIIKTTSNKAILRIILVTSIFTLIFCSTIGISCHLMSKIRVLKYKRLLEIGDLGLNEEVALRRFSYTELKRATNGFKQELGKGSFGAVYKGVLYKAGRCRRFIAVKRLEKLVEDGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGDERLPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRNLDANVSEPNEILLSGWAYKCFVAGEVHKLVHWEEVDKNVVENTVKVALWCIQDEPVLRPSMKSVVLMLEGVTHVPMPPCPTSNSM 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02483 568 ProSitePatterns Protein kinases ATP-binding region signature. 287 313 IPR017441 GO:0005524
Aip03g02483 568 SUPERFAMILY Protein kinase-like (PK-like) 267 553 IPR011009 -
Aip03g02483 568 ProSiteProfiles Protein kinase domain profile. 281 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02483 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 566 IPR045874 GO:0004672
Aip03g02483 568 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 14 566 - -
Aip03g02483 568 Gene3D Phosphorylase Kinase; domain 1 253 360 - -
Aip03g02483 568 Pfam Protein kinase domain 284 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02483 568 Pfam S-locus glycoprotein domain 18 85 IPR000858 GO:0048544
Aip03g02483 568 SMART serkin_6 281 551 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02483 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Aip03g02483 568 Gene3D Transferase(Phosphotransferase) domain 1 361 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02483 Aip-Chr3 42261219 42262925 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02483 200 563 Receptor kinase-like Gene Family AT3G55550 38.770 1.27e-66 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02483 Pkinase 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02483 - - aip:107633068 1160.59