Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02481 ATGACAGGTGCTAATGTTGCAGCGGCAACAACGGCGCTCCTTCTTCTCATCACGACCATTTCCTCCTCATCGCAAGACCCACGTCATAATCAGATACCACTTGGCTCAGCTCTTTACCCAACTACTCAGCCCACTTCATGGCTTTCCCCTTCCGGCCTCTTTGCATTTGGCTTTTACCAGCAGCAGCAGGCCAATAATAATGGCGGTTTTGCCCTTGGGATTTGGTTGGTTGGCAGAAACGGAAGCAAAAACACAGTGGTATGGACTGCAACAACCAGTGATGATCCGCCGCTCACTCCGAATGCAAGACTCGAACTAACCAAACAAGGTAAACTTGTTCTTGAAACACAAGAGAGTAATAATCTTATTGCTAATACCAGTGAAACTGCTTACTCTGCCTCCATGCTTGATTCTGGAAACTTAATTCTCTACCACCAGAATTCCACCATCATATGGCAGAGTTTTGACCACCCAACTGACACAATCCTAGGGGGCCAGTCTCTACCATATGAAGCTCAACTGCTGTCTGGTTATAGCTCGTCATCAAGAAAACGATTTATTCTCGCCATGCAGTCTGATGGGAATCTTGTTCTGTATCCTGGAGACACGGCGAACACACCCATCGATGCGTATTGGGCATCTGGAACTTTCAACCCTCCCGGTCTCAAGTATCATCTTTACCTTGATGCCAACGATAGCTCTCTGCTCATCAAGGACAACACTTCAAGCATCCAAAGGGTTCTCTATTCTGGTTCATCTTTGCCGGGAAGAGGAAGCAAAATATATCGTGCTACACTGGATACTGATGGATTCTTCCGGTTGAATGCGCATGATATCAACAATGCCAACCTCTACACTCTCTCGGGATGGCCACAAGGCAACAATTCTTGTTTGGTAAAGGGTATCTGTGGCCACAACAGCATCTGCAAATTCGATGCCAGGAAGCCACACTGCACTTGTCTTCCTGGATACGACTATATTGATCCCAACCAACACAGTCTTGGTTGTAGAAGAAACATTTCCCAACCAAACTGCGCTGGAAAAGATTACATGGTCCCTATGCAAAATTTGGTGTGGGCCAATCGTCCTTATTACGCCGCGGCCAAGAAGTTGCAGAAAGAGGAATGCGCATCCTCTTGTTTGGTGGATTGCAAGTGCTGGGCTGCTCTTTATACCAACGGGCTCTGCATCAGGCAAGAGCCCCCTCTCAGGTATGCTAGATTCACGGTGCAAGACGAACAACCCTCCTCCGCGTTCTTGAAGGTCGGAAACATGAAGCTCAATGCTCCTATGCCTGTGCCTGATCAACCACCTCAAAAGAGTAGTACTAGTGACAAAGCAATTCTGCGTATTGTTCTTGTTACCTCCATTTTCACTCTGATTTTCTGCTCAACTATTGGGATATCTTGCCATTTGATGTCGAAGATTCGAGTTCTCAAGTACAAGAGGCTCTTGGAGATTAGGGACTTGGGGCTGAATGAGGAAGTGGCTTTGAGGAGATTTTCATACAGTGAGCTCAAGAGAGCAACCAACGGTTTCAAACAAGAATTGGGAAAGGGCTCTTTTGGAGCAGTGTACAAAGGGGTTTTATACAAGGAGGGAAGAAGTAGGAGACTCATTGCGGTGAAGAGACTTGAGAAGTTGGTTGAAGATGGAGAAAGAGAGTTCCAAGCAGAGGTGAGAGCCATTGGAAAAACACACCACAGGAACCTTGTTCGCTTGCTTGGCTTCTGTGCCGAGGGTCCCAAAAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGGAAGCTTCTCTTTGGCGATGAAAGGCTTCCAGATTGGGATGAAAGAGTCAGAATAGCTCTGGATATTGCAAGAGGGATCCTCTATCTGCATGAAGAATGTGAGGCACCCATCATTCACTGCGACATAAAGCCTCAAAATATCTTGATGGATGAGTTCTGGACTGCCAAAATATCTGATTTCGGGCTAGCAAAGCTTCTCATGCCGGATCAAACAAGAACCTTCACAGGAGTTAGAGGGACAAGAGGGTACTTGGCCCCTGAATGGAACAAGAACACACCAATAACAGTGAAGGCTGATATCTACAGCTATGGGATAGTGCTTCTTGAGACAGTGTGTTGCAGGAGAAACCTTGATGTTAATGTGTCAGAGCCAAATGAGATTCTTCTGTCTGGTTGGGCCTATAAGTGCTTTGTTGCTGGAGAGGTGCACAAGCTAGTTCATCGGGAAGAAGTGGATAAGAATGTTGTGGAAAATATGGTGAAGGTGGCACTGTGGTGTATCCAAGATGAACCTGTTCTCCGGCCTTCAATGAAGAGTGTGGTGCTCATGCTTGAAGGGGTTACTGATGTGCCAGTTCCTCCTTGCCCAACTTCTAATTCCATGTGA 2397 0.4656 MTGANVAAATTALLLLITTISSSSQDPRHNQIPLGSALYPTTQPTSWLSPSGLFAFGFYQQQQANNNGGFALGIWLVGRNGSKNTVVWTATTSDDPPLTPNARLELTKQGKLVLETQESNNLIANTSETAYSASMLDSGNLILYHQNSTIIWQSFDHPTDTILGGQSLPYEAQLLSGYSSSSRKRFILAMQSDGNLVLYPGDTANTPIDAYWASGTFNPPGLKYHLYLDANDSSLLIKDNTSSIQRVLYSGSSLPGRGSKIYRATLDTDGFFRLNAHDINNANLYTLSGWPQGNNSCLVKGICGHNSICKFDARKPHCTCLPGYDYIDPNQHSLGCRRNISQPNCAGKDYMVPMQNLVWANRPYYAAAKKLQKEECASSCLVDCKCWAALYTNGLCIRQEPPLRYARFTVQDEQPSSAFLKVGNMKLNAPMPVPDQPPQKSSTSDKAILRIVLVTSIFTLIFCSTIGISCHLMSKIRVLKYKRLLEIRDLGLNEEVALRRFSYSELKRATNGFKQELGKGSFGAVYKGVLYKEGRSRRLIAVKRLEKLVEDGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLLFGDERLPDWDERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGVRGTRGYLAPEWNKNTPITVKADIYSYGIVLLETVCCRRNLDVNVSEPNEILLSGWAYKCFVAGEVHKLVHREEVDKNVVENMVKVALWCIQDEPVLRPSMKSVVLMLEGVTDVPVPPCPTSNSM 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02481 798 Gene3D Phosphorylase Kinase; domain 1 489 590 - -
Aip03g02481 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 274 IPR036426 -
Aip03g02481 798 PIRSF SRK 3 798 IPR024171 GO:0004674
Aip03g02481 798 SUPERFAMILY Protein kinase-like (PK-like) 497 782 IPR011009 -
Aip03g02481 798 SMART blect_4 38 158 IPR001480 -
Aip03g02481 798 Pfam D-mannose binding lectin 85 172 IPR001480 -
Aip03g02481 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 218 IPR036426 -
Aip03g02481 798 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 796 IPR045874 GO:0004672
Aip03g02481 798 ProSitePatterns Protein kinases ATP-binding region signature. 517 543 IPR017441 GO:0005524
Aip03g02481 798 ProSiteProfiles Protein kinase domain profile. 511 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02481 798 ProSiteProfiles Bulb-type lectin domain profile. 29 156 IPR001480 -
Aip03g02481 798 ProSiteProfiles Bulb-type lectin domain profile. 159 287 IPR001480 -
Aip03g02481 798 Gene3D - 26 156 IPR036426 -
Aip03g02481 798 Gene3D - 159 296 - -
Aip03g02481 798 SMART serkin_6 511 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02481 798 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 24 796 - -
Aip03g02481 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Aip03g02481 798 Gene3D Transferase(Phosphotransferase) domain 1 591 790 - -
Aip03g02481 798 Pfam Protein kinase domain 514 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02481 798 CDD B_lectin 48 158 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02481 Aip-Chr3 42177288 42179871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02481 433 787 Receptor kinase-like Gene Family AT1G56120 41.667 2.62e-68 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02481 Pkinase 8.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02481 - - ahf:112707609 930.628