Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02478 ATGTCCACATACGAGCATGATGTTAAGACTGATTCTGATAATGATTTGGGTGATTTTGATTATGAATCGAATGCACACGATGATGTTGAAGATGATGATGTTGATTCGTTGGATTCTACTAGCAAGAGTGAACAAGATTGTAGTGTAAAAAGAATAGCAATTTTAATGGTTGAGAATATTTGGAACCTGGAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAATGCTTATGCTTGTTGGCATGGCTTTGTAATGAGGAAGGATGACGTCGTGAAGGATAAGGAAGGTAAAATTATTTGCAGGCAACTTGTTTGCAATAAAGAGGGCTGGAGGAATATGATGTATCTTGATCTGGATAATAGATCAAGGGAGGCAAGGTCACTCATGGAAACCAAGTGTCCAGCTCGTCTTAAGATCAAGGTTGACTACGGCTGTGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCATGATTTGACCCCCCCCCAATTTACGCATCTTGTTCCAGCCAATCGTCGTCTCACTGTTACTGATAAAGTCCAAGTGAAAAATCTTCATAATTTTGGTGTCAAGACGTGCCATATTATGGGATATATTGCATTCCAGAAGGGTAGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCATATTGATGGTTATCATAGATCAAAAGTAAAAAACGAGGATGCCAATGCAGCAATAAACTATTTGATTGGAAAATTGAACAACGATCCGCTGTTCTTTGGGAAGTATACGTTCACTAGTGACCAAAGGCTCGAGCATATATTTTGGGCAGACGGGCAATCAATTGTCGACTATCACTGGTTTGGAGATATTATTGCCTTTGATTCAACGTACAAGAAGAATAAATACAGCAAACCTTTGGTCATTTTCTCCGGATGCAATCATCATGGGCAGACAGTTATTTTCGGCTCCGGTCTACTATCAGATGAAACGACAGACATGTATAAGTGGTTGTTGGAAATGTTTGTTGAAGCGATGGGTGGGAATCATCCTAAAGCAGTTATAATCGATGAAGACtga 1062 0.3964 MSTYEHDVKTDSDNDLGDFDYESNAHDDVEDDDVDSLDSTSKSEQDCSVKRIAILMVENIWNLEFRTEDEACQFYNAYACWHGFVMRKDDVVKDKEGKIICRQLVCNKEGWRNMMYLDLDNRSREARSLMETKCPARLKIKVDYGCGRWKVSCFVESHNHDLTPPQFTHLVPANRRLTVTDKVQVKNLHNFGVKTCHIMGYIAFQKGRYRHAGFTRKDLYNHIDGYHRSKVKNEDANAAINYLIGKLNNDPLFFGKYTFTSDQRLEHIFWADGQSIVDYHWFGDIIAFDSTYKKNKYSKPLVIFSGCNHHGQTVIFGSGLLSDETTDMYKWLLEMFVEAMGGNHPKAVIIDED 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02478 353 Pfam FAR1 DNA-binding domain 73 163 IPR004330 -
Aip03g02478 353 MobiDBLite consensus disorder prediction 1 41 - -
Aip03g02478 353 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 353 IPR031052 GO:0006355
Aip03g02478 353 MobiDBLite consensus disorder prediction 1 23 - -
Aip03g02478 353 PANTHER OS02G0262500 PROTEIN 60 353 - -
Aip03g02478 353 Pfam MULE transposase domain 285 353 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02478 Aip-Chr3 42167381 42168442 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip03g02478 FAR1 5.4e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02478 - - ahf:112742151 625.935