Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02477 ATGGCTTCAAACCGCTTTCATGTTCTGCTCTTATGGCTATCCTTGTGTGTGGCTCTGGCAGATGAAGTTGCAGTTGAGAACATGTATATTGGGTTGGATGATATTCTCTCTCCTCTTGATAGTAACACGACACACCCATCTTGGTTATCAAGTTCTGGTCACTTTGCATTCGGCTTTTACCGTCACGGTGATGGCCACGGCTATGCCATTGGAATATGGCTGATGGGTGGAACCACCAACACTGTTGTGTGGACCACTAACCGTGACGACCCTCCACTCTCATCTAACTCCACCTTGCAATTAACCGTAGAGGGCCTACTTCTGAAGCAAGGTAGTGATGACCGAGGACAACTCTATGTGCCTTCAGAGCCAGCAGGTTCTGCATCCATGCTCGATTCCGGTAACTTTGTGATCTATAGCCAAGAAAGTTCTTCCTTTGTTGTGTGGCAAAGCTTTCATCACCCAACTGACACCATATTAGGAGGCCAGAATTTAACTATTCTGAACCAGCTAGTCTCTAGCAGGTCCACTTCAGACCGTTCCACTGGACACCACTATCTTGCCTTTCAGGATGATAACAACCTTGTTGCTTATCCCATCAATAGCTCTGGCACCGCTTCTGATGCTTACTGGGCTTTCAGGGATCAGAACATTTATCATGGGACAGAGGTGGCACAGTTGAGTCTTGACGCTAAAGGCTATCTCTGCTTCAGTGTCTTTCAATGCTTGGCTAATAACACTAACCAGCAAATCAAGCAACAGAACACTAGTTCAATCTACCGCGCAACTCTTGATGTTGATGGAAACCTGAGATTGTATGAGCACCTATTTGACGCAAACTCATCATCATCACTTCTTGTTCATACGAATACGGTGTGGCAAGCCTTGACTGATGAATGCCAAATCAAGGGGTTTTGCGGCTCCAACAGTTACTGCTCCAACACAAGCGGCAATGCTAGATGCCACTGTTATCCTGGTTTCGTCCCCTACAACAACAAAACCAGTGGTGGTAATGCCATGTTTCTGGAGTGCAAACTGAACTACAGCAAGGATGATTGCGAAACAAGTGGTGGCCGAAACTATAACATTGTTTCCTTGGAGGAGATGCAGTGGAATTATGACTACCCATATTGGGCTAAACTAATGAGCATGGAAGCTTGTAACAAGTCTTGCAAGGAGGATTGTGATTGTGCAGCAGCATTATACACAAATGGCCGATGCAACAAATATAGTCTTCCACTCAGTTATGGCAGAAAGGCTCCAAATGCATCAGATACAGGCATGGCACTCTTCAAGGTTCCTTCGGAATATGTCATCAGGAAAAACACTACCACCTCATCTCCCAAGAATCCTAATGCCATTGTTAATAACCGGAGAGGTCTGATACTGATTCTAGCCTCTACTTTGGGTTCCCTTTCATTTCTCTGTGTGGTCTTTGTTGTGTCTATTTTCTTCATTTATAGGAGCCAAGTTCATAGATTTACGAAGCTGTCTGCAAGTTCAAATCTTGGATTCACCGAGGAATGTTCGCTACGCTCGTTTTCCTTTGATGAACTTGTCAAAGCAACTAGTGGCTTCACAGAGGAGGTAGGCAGAGGATCCTTCGGAGCAGTTTATAGAGGCACAATAGGAGAGAATAGCAAAAGGATTGCCGTCAAGAGAATAGAGAAGATTGTCGATGAAGGGGAGAGGGAATTCCGAGCCGAAATCACTGCCATTTCTAGAACTCATCATAGGAATCTGGTTAAGCTCATTGGCTTCTGTATTGAGGGGTCAAGGAAGCTTCTTGTCTATGAATACGTCAGCAATGGATCTCTTGCCAATCTTCTCTTCAAGACTAAGAAGCATCTGCCATGGAAAGAGAGACTCAAAATTGCATTGGATGTGGCCAGAGGAGTCCAGTATCTACATGAAGAGTGTGAAGTTCGTATTGTCCATTGTAATCTGAAGCCTCACAATATACTAATGGATGAACTATTGACGGCTAAGATATCGGATTTCGGATTGGCAAGGCTATCAAAGCCGGAACTTTTGAGTATTAGACCGGACAAGAACGAGGTTAAAACCGGGTACTTAGCACCTGAATGGCAAAAGGAGGCATTGGCATCGGTTAAAGCTGATGTTTTCAGTTATGGGATAGTACTGTTGGAGATTGTATGCCGCAGAAGGAGTATAGAAGTAAATGTTCCATCACCGGAGGAGGTGCTTCTTTCTAGTTGGGCATATCATTGCTTTGCAACTGAGCAGTTACATAAAGTTGTTGTATACAATGAGGATGAAAAGCAAGACATGGATTGGAAAACACTGGAAAGAATGGTGAAGGTGGGGCTGCTGTGTGTTCAAGATGACCCATCTCTGCGTCCTTCAATGAAGAATGTCATTTTGATGTTGGAAGGATGGAAAGATGTTCCAATTCCCCCATCCCCATCCTGTTAG 2436 0.445 MASNRFHVLLLWLSLCVALADEVAVENMYIGLDDILSPLDSNTTHPSWLSSSGHFAFGFYRHGDGHGYAIGIWLMGGTTNTVVWTTNRDDPPLSSNSTLQLTVEGLLLKQGSDDRGQLYVPSEPAGSASMLDSGNFVIYSQESSSFVVWQSFHHPTDTILGGQNLTILNQLVSSRSTSDRSTGHHYLAFQDDNNLVAYPINSSGTASDAYWAFRDQNIYHGTEVAQLSLDAKGYLCFSVFQCLANNTNQQIKQQNTSSIYRATLDVDGNLRLYEHLFDANSSSSLLVHTNTVWQALTDECQIKGFCGSNSYCSNTSGNARCHCYPGFVPYNNKTSGGNAMFLECKLNYSKDDCETSGGRNYNIVSLEEMQWNYDYPYWAKLMSMEACNKSCKEDCDCAAALYTNGRCNKYSLPLSYGRKAPNASDTGMALFKVPSEYVIRKNTTTSSPKNPNAIVNNRRGLILILASTLGSLSFLCVVFVVSIFFIYRSQVHRFTKLSASSNLGFTEECSLRSFSFDELVKATSGFTEEVGRGSFGAVYRGTIGENSKRIAVKRIEKIVDEGEREFRAEITAISRTHHRNLVKLIGFCIEGSRKLLVYEYVSNGSLANLLFKTKKHLPWKERLKIALDVARGVQYLHEECEVRIVHCNLKPHNILMDELLTAKISDFGLARLSKPELLSIRPDKNEVKTGYLAPEWQKEALASVKADVFSYGIVLLEIVCRRRSIEVNVPSPEEVLLSSWAYHCFATEQLHKVVVYNEDEKQDMDWKTLERMVKVGLLCVQDDPSLRPSMKNVILMLEGWKDVPIPPSPSC 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02477 811 CDD EGF_CA 298 327 - -
Aip03g02477 811 Gene3D Transferase(Phosphotransferase) domain 1 601 804 - -
Aip03g02477 811 ProSiteProfiles EGF-like domain profile. 296 333 IPR000742 -
Aip03g02477 811 SUPERFAMILY Protein kinase-like (PK-like) 506 800 IPR011009 -
Aip03g02477 811 Pfam D-mannose binding lectin 81 168 IPR001480 -
Aip03g02477 811 Pfam Protein tyrosine and serine/threonine kinase 526 795 IPR001245 GO:0004672|GO:0006468
Aip03g02477 811 SMART blect_4 39 155 IPR001480 -
Aip03g02477 811 SUPERFAMILY EGF/Laminin 298 333 - -
Aip03g02477 811 ProSiteProfiles Protein kinase domain profile. 524 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02477 811 Gene3D - 30 153 IPR036426 -
Aip03g02477 811 ProSitePatterns Protein kinases ATP-binding region signature. 530 553 IPR017441 GO:0005524
Aip03g02477 811 PIRSF SRK 2 811 IPR024171 GO:0004674
Aip03g02477 811 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 810 - -
Aip03g02477 811 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 19 810 - -
Aip03g02477 811 ProSiteProfiles Bulb-type lectin domain profile. 33 151 IPR001480 -
Aip03g02477 811 CDD STKc_IRAK 530 799 - -
Aip03g02477 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 214 IPR036426 -
Aip03g02477 811 Gene3D Phosphorylase Kinase; domain 1 487 600 - -
Aip03g02477 811 Gene3D - 157 299 IPR036426 -
Aip03g02477 811 Pfam S-locus glycoprotein domain 248 330 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02477 Aip-Chr3 42135168 42137842 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02477 469 804 Receptor kinase-like Gene Family AT4G02410 37.500 1.05e-60 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02477 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02477 - - ahf:112707637 911.368