Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02476 ATGAATACTCTTTCTGCAAGTGCCGTTGGTATCTTCCTATTGCTCCTGTCCTTATGTTATGTAGGAAGAACAACAGAAACACAAGTTCCAGTTACAAAGATAACACCCGGTTCCTCACTTCACCCTGCCACTAACCCTACTCACTGGTCTTCTTCTTCTGGCCAATTTGCATTTGGCTTTTATAAGCAAGGTAGTGGCTATGCCGTTGGAATCTGGTTGGTTGATGCGAAGAACAATACGGTGGTATGGACTGCAAACCGAGACGATCCACCAGTTACTTCAAATGCAACTCTACAGCTGACTGCACAAGGTAAATTTGTTGTGCAAACAGAACAAGGAAAAGAGATGCTCTTTGCTAATGCAACTGCTTCCTATGCCTCCCTGCTCGATTCTGGAAACTTTGTACTATATAACCAGACTTATGGCATCATATGGCAGAGTTTTGATTTCCCAACCGATACTATGTTAGGTGGTCAATCTCTACCTTCTGGAGGTCAATTATTGTCTAGTTCTTCAGATACCAATCATTCAAGTGGACGATTTCGCCTTAAGATACAGGATGATGGAGACTTTGGTCTGTATCCAGCACATACAACTGACACAACAAGGGATGCTTACTGGCCGCAAGGTACTCCATTATATAATGATAAGATAGTCAAAGGCAAAGCTTATCTTTACCTCAACAAAACAGGTTTGCTGGTGTCCAAGAATGGTAGCAATAGTGTTATTTCGAGCCATTATGGACCTTTATCTGGCGATAGTGTCGGCAGCAACCAGACCATTTATCGTGCAACCCTGGACCCTGATGGGGTTTTCAGGCTGTATGCTCATGATAAAGGTAGTGTGTCCAAGAAAGTTTCACAGTGGCCATGGGATGACGGATGTGAGGTAAAGGGTTACTGCGGCTTTAACAGCTACTGTACATTCAACGACGACAAACCCTACTGCTATTGTCTTGAAGGTTTCGACTTTATAGAGCCAGATCAACCCACTCTTGGCTGCAAAAGGAACTTCTCAATTGCAGAGTGTAGAGGTGAGAAAGGCAGCGCAGCTGCAGCCTATTATAACATGGTCACCATGCTAGATATTCAATGGGATGATCACGCTTATTCCGGGGCCGATATGGAGCACGAACAAGAATGCTCTGATTCTTGTTTGGCTGATTGCAACTGTTGGGGTGCCCTTTATGAGAACGGGAAATGCTTGAAACAAGGGATGCCTTTCAGATATGTCTCAAGGAGAGTTGAAGAGTTCTCAGCCACAGCCAGCACAATGTTCTTAAAGGTGGGAAATATCACCCATAAAAGCAGGAATCCTAATGATGTATTCATGTCTCTCCCAATCAGGAGTACTAGCAACAAAGCAGTTGTCACTATCATTGTCATCACATCGGTGTTCACTCTTCTTTTATGCTCAATGATCACCATCTCTTGCCACCTGATTTACAAGACTCGAGTTCTAAGGCTTCAGAGGCAGATGGAGACTGGGAACTTAGGCCTAAATGAAGAAGTGGCCTTGAGAAGATTTTCATATAGTGAACTGAAGCGGGCAACAAACGGTTTCAAGCAAGAGCTGGGTAAGGGTTCTTTTGGAGCAGTCTACAAAGGCAGCTTATACAAAAGTAGAAGATCCATTGCAGTGAAGAGACTAGAGAAGCTAGTTGAAGAAGGAGAAAGAGAGTTCCAAGCAGAGGTGCGAGCCATCGGAAAAACACATCACAGGAACCTTGTTCGCTTGCTGGGATTTTGTGCCGAGGGTCCCAAGAGGCTTCTGGTCTATGAATACATGAGTAATGGTTCCCTTGGAAAGCTCATCTTTGGGGGTGAAAAGCGTCCTGATTGGCATGAGAGAGTGAGAATAGCACTGGATATTGCAAGAGGGATCCTTTATCTCCATGAAGAGTGTGAGGCACCCATTATTCACTGTGACATAAAGCCTCAAAATATCTTGATGGATGAATTTTGGACTGCAAAAATATCTGATTTTGGTCTAGCAAAACTCTTAATGCCAGATCAAACGAGAACCTTCACAGGGATTAGAGGGACAAGAGGGTATGTGGCTCCAGAATGGCACAAGAACACCCCAATATCAGTGAAGGCAGATGTTTACAGCTATGGTGTTGTGCTGCTGGAAGTTATATGCTGCAGAAGGAACATCGAAATTAGCGTTTCTGTACCAGAGGAGATTCTTCTCTCTAGCTGGACCTATAACTGCTTTGTTGCTAAAGAGTTGCATAAGCTAGTTCCTAGGGAAATAGTGGATAAGAATGTTTTGGAAAATATGGTGAAGGTAGCACTGTGGTGTATCCAAGATGAGCCTGCTCTCCGGCCAACAATGAAGAGTGTGGTGTTGATGTTAGAAGGGGTTACTGATGTAGCTATTCCTCCTTGTCCAACAACCTCTATTTCTATGTAA 2415 0.4385 MNTLSASAVGIFLLLLSLCYVGRTTETQVPVTKITPGSSLHPATNPTHWSSSSGQFAFGFYKQGSGYAVGIWLVDAKNNTVVWTANRDDPPVTSNATLQLTAQGKFVVQTEQGKEMLFANATASYASLLDSGNFVLYNQTYGIIWQSFDFPTDTMLGGQSLPSGGQLLSSSSDTNHSSGRFRLKIQDDGDFGLYPAHTTDTTRDAYWPQGTPLYNDKIVKGKAYLYLNKTGLLVSKNGSNSVISSHYGPLSGDSVGSNQTIYRATLDPDGVFRLYAHDKGSVSKKVSQWPWDDGCEVKGYCGFNSYCTFNDDKPYCYCLEGFDFIEPDQPTLGCKRNFSIAECRGEKGSAAAAYYNMVTMLDIQWDDHAYSGADMEHEQECSDSCLADCNCWGALYENGKCLKQGMPFRYVSRRVEEFSATASTMFLKVGNITHKSRNPNDVFMSLPIRSTSNKAVVTIIVITSVFTLLLCSMITISCHLIYKTRVLRLQRQMETGNLGLNEEVALRRFSYSELKRATNGFKQELGKGSFGAVYKGSLYKSRRSIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGPKRLLVYEYMSNGSLGKLIFGGEKRPDWHERVRIALDIARGILYLHEECEAPIIHCDIKPQNILMDEFWTAKISDFGLAKLLMPDQTRTFTGIRGTRGYVAPEWHKNTPISVKADVYSYGVVLLEVICCRRNIEISVSVPEEILLSSWTYNCFVAKELHKLVPREIVDKNVLENMVKVALWCIQDEPALRPTMKSVVLMLEGVTDVAIPPCPTTSISM 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02476 804 CDD B_lectin 50 151 IPR001480 -
Aip03g02476 804 Pfam S-locus glycoprotein domain 257 323 IPR000858 GO:0048544
Aip03g02476 804 Gene3D - 150 286 IPR036426 -
Aip03g02476 804 ProSiteProfiles Bulb-type lectin domain profile. 31 149 IPR001480 -
Aip03g02476 804 SMART blect_4 40 151 IPR001480 -
Aip03g02476 804 Gene3D Phosphorylase Kinase; domain 1 483 595 - -
Aip03g02476 804 Pfam D-mannose binding lectin 80 161 IPR001480 -
Aip03g02476 804 Coils Coil 547 567 - -
Aip03g02476 804 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
Aip03g02476 804 ProSiteProfiles Protein kinase domain profile. 519 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02476 804 SMART serkin_6 519 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02476 804 Gene3D Transferase(Phosphotransferase) domain 1 596 793 - -
Aip03g02476 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 639 651 IPR008271 GO:0004672|GO:0006468
Aip03g02476 804 CDD STKc_IRAK 525 788 - -
Aip03g02476 804 PANTHER RUST RESISTANCE KINASE LR10-RELATED 27 802 IPR045874 GO:0004672
Aip03g02476 804 Pfam Protein kinase domain 522 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02476 804 PIRSF SRK 3 804 IPR024171 GO:0004674
Aip03g02476 804 Gene3D - 29 149 IPR036426 -
Aip03g02476 804 SUPERFAMILY Protein kinase-like (PK-like) 504 787 IPR011009 -
Aip03g02476 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 211 IPR036426 -
Aip03g02476 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE LECRK1 27 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02476 Aip-Chr3 42121474 42124090 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02476 373 798 Receptor kinase-like Gene Family AT5G38280 36.923 1.65e-68 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02476 Pkinase 2.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02476 - - ahf:112707609 1451.42