Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02475 ATGGCATCAACACCTGCTCTGTTATTGCTAGTGTTGTTGATGCTATTTGCAAATGAAACCACAGCTGAGACAAACCACACCCACCTCATTCCTATAGGATCTACGATCTCTCCTACAGGCAAAAATACTTCATGGTCTTCACGTTCTGGCCTCTTTGCTTTTGGCTTTTACCCTCACGGTAACAGCTATGCTGTTGGAATATGGCTGCTTACTCAACCTAAACACACAATTGTGTGGACTTATCATCCTTATAGTCCATCAATGTCTTCAAATTCCACATTGAGATTGACCAAAGAAGACGGGCTACTTCTTCTGCAAGAAAATGAAGACCCAGAGTTTCTCATTCCACTTTATTTTTTACATCAGGCTAAAGTAGAAGTGGCTTCAGCATCTATGCTTGATTCTGGCAACTTTGTGCTTTATGATAAGAATTTTAGTATGTTATGGAGTAGTTTCGGTGACCCAAGTGACACCATATTAGGTGGCCAGAATTTAACAGGTGGAATGGGCCTGGTCTCTAGTGTGTCACAATCAGACCATTCGAGTGGACATTTTTTGCTAAGCAGGCAGCTTGATGAACACCTAGCTGCTTGCCGTGTGAACAGCACATGTGAACCGGAGGATGCTTATTGGGCTAAAAACACATACTTTGAAGGTTATGGTTATCTACAGCTCAGTCTTAGCATTGAAGGTTCGCTTTGCCTAAAAGATTATTCCTCTGGTTCTGAACTGGAGTGTTTAGCTAGTAGCAAGAACCTCACAGACAAGTCAAAGAATGCAACTTTTATCTACCGTGCTACACTTGATGAAGATGGGGACTTCAGACTGTATGCTCACCAATTCGAGGGAAATACTAGCTCAGGTGTGCAAACGCTGTGGAAAGCCGTGGAGGGGGATAAATGTCAAGTCCCACTTTGTGGCTTGAACAGTTACTGCTTCATCAAGAGCGACAAAGTCATGTGTCAGTGTTATCCCGGTTTCATCCCTATCAAGAGTGGTGGTAACGATACCAGGTTTCTCGACTGCGAACAGAACCACAGCAAAGATAATTGTGAGAGCATAGAGGACCCAACAATGATGTACAATATGACTTCCTTAAAGGATATCTACTGGGGTGGTTCTCCTTATTTGGTTGTGCCAATAGAGATGGAAACTTGCAAGAAGTCTTGTCGGAAAGACTGTGATTGCAGGGCGGTGTTATATAAGAGCGGCATCTGCGAAAAATATAAGCTTCCACTTCTATATGGCAGAAGCTCTAAAGATGCATCAATGACGGCCTTCGTGAAGATGCCTTCAGGAATTGTCCTAAGTCCTACTTCAAACCAAACTGCTCTATCTCCAACAAAGCCCTGCGTCTTTGTTGATGACAAGAGAAGTCTTATAATGATTCTGTCCCTTACCCTGGGTTGGATTTCGTTTTTTGGTTTGGTCTTTGTATTGTATATTTTCATCATTTACAGGCATCAAGTTCATAGGTATGCAATATTATCTGCAAGTGAAAATCTAGGATTTGTAGAAGAATGTTCCTTGCGTTCATTTTCCTTTGATGAACTTGTGAAATCAACTGGAGGCTTTGCAGAGGAGATAGGCAGAGGATCTTTTGGAGCGGTTTATAGAGGCACAATTGGTGACAGTAACAGAAGGGTTGCTGTGAGGAGACTTGAGAAATTTGTTGATGAAGGGGAGAGGGAATTCCAAGCAGAAATCACAGCCATTGCTCGAACTCATCATAGGAATCTGGTGAAGCTCATTGGTTTCTGCATTGATGGATCCAGGAAGCTTCTTGTTTTTGAATATCTCAGCAATGGGTCTCTTGCAGATCTTCTCTTCAAGTCTCATATGACTATGGCTTGGAAAGAGAGATTAAAGATTGCATTAGACGTGGCTAGGGGAGTCTTGTATCTGCATGAGGAGTGTGATGTTCGGATTATCCACTGCAACATAAAGCCTCAGAATATACTCATGGATGAAGTGTGGACTGCAAAGATATCCGATTTTGGATTTGCAAGGCTGTTGAAACCCAGCTATTCAAGAATGAAGAAAATGGATGACAAGAGAAGTAGGTACTTGGCACCTGAATGGCAGAAGGATGAATCAGTGTCAGTTAAAGCTGATGTTTATAGTTTTGGGGTGGTGTTACTGGAGATTGCATTCCGTAGAAGCAGTATTGATATGAATGTTGCATCACCAGAAGAGATAGTTCTTTCCAGCTGGGTATATAAATGCTATGCGGCGGGGCAGTTGAATAAGCTTGTGGCAGATGATGAAGGCGAAGATGTAGATTGGAAAATACTTGAAAGAATGGTGAAGTTGGGGTTGTGGTGTGTTCAAGACAAACCATCTCTTCGTCCGACAATGAAGGATGTGATCTTAATGTTGGAAGGACTGAAAGATATTCCGGTTCCTCCCTCTCCAGCCTTCTTTGTTGAATAA 2433 0.4233 MASTPALLLLVLLMLFANETTAETNHTHLIPIGSTISPTGKNTSWSSRSGLFAFGFYPHGNSYAVGIWLLTQPKHTIVWTYHPYSPSMSSNSTLRLTKEDGLLLLQENEDPEFLIPLYFLHQAKVEVASASMLDSGNFVLYDKNFSMLWSSFGDPSDTILGGQNLTGGMGLVSSVSQSDHSSGHFLLSRQLDEHLAACRVNSTCEPEDAYWAKNTYFEGYGYLQLSLSIEGSLCLKDYSSGSELECLASSKNLTDKSKNATFIYRATLDEDGDFRLYAHQFEGNTSSGVQTLWKAVEGDKCQVPLCGLNSYCFIKSDKVMCQCYPGFIPIKSGGNDTRFLDCEQNHSKDNCESIEDPTMMYNMTSLKDIYWGGSPYLVVPIEMETCKKSCRKDCDCRAVLYKSGICEKYKLPLLYGRSSKDASMTAFVKMPSGIVLSPTSNQTALSPTKPCVFVDDKRSLIMILSLTLGWISFFGLVFVLYIFIIYRHQVHRYAILSASENLGFVEECSLRSFSFDELVKSTGGFAEEIGRGSFGAVYRGTIGDSNRRVAVRRLEKFVDEGEREFQAEITAIARTHHRNLVKLIGFCIDGSRKLLVFEYLSNGSLADLLFKSHMTMAWKERLKIALDVARGVLYLHEECDVRIIHCNIKPQNILMDEVWTAKISDFGFARLLKPSYSRMKKMDDKRSRYLAPEWQKDESVSVKADVYSFGVVLLEIAFRRSSIDMNVASPEEIVLSSWVYKCYAAGQLNKLVADDEGEDVDWKILERMVKLGLWCVQDKPSLRPTMKDVILMLEGLKDIPVPPSPAFFVE 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02475 810 Pfam D-mannose binding lectin 76 165 IPR001480 -
Aip03g02475 810 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 807 - -
Aip03g02475 810 CDD STKc_IRAK 529 796 - -
Aip03g02475 810 Gene3D - 156 296 IPR036426 -
Aip03g02475 810 Pfam Protein tyrosine and serine/threonine kinase 526 791 IPR001245 GO:0004672|GO:0006468
Aip03g02475 810 Gene3D - 30 153 IPR036426 -
Aip03g02475 810 Gene3D Transferase(Phosphotransferase) domain 1 600 800 - -
Aip03g02475 810 ProSiteProfiles Protein kinase domain profile. 523 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02475 810 SMART blect_4 36 155 IPR001480 -
Aip03g02475 810 ProSiteProfiles Bulb-type lectin domain profile. 27 153 IPR001480 -
Aip03g02475 810 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 1 807 - -
Aip03g02475 810 Gene3D Phosphorylase Kinase; domain 1 489 599 - -
Aip03g02475 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Aip03g02475 810 SUPERFAMILY Protein kinase-like (PK-like) 505 803 IPR011009 -
Aip03g02475 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 215 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02475 Aip-Chr3 42118297 42120872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02475 510 808 Receptor kinase-like Gene Family AT5G38280 39.088 6.70e-61 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Aip03g02475 PK_Tyr_Ser-Thr 6.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02475 - - aip:107630435 1631.69