Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip03g02450 ATGGGGGTGGGGGTAGTTTTGTCATTGACTCTTCAGCTGGTGAAGCTCTTCATCATTGGCTCTGTTGTGACACTGCAAGGATCCAAAGGGTCTGTTATATCCCCATCTCCGGCATTCGCTCCGGTCATTCATCCCAGAGGAGAAACACTTGGGCCTATCCATCATGGACACTGGAGAAGCAATGCACCGAGCTCCCCAGTGGATCCAGATGGGTTTCTCCTATCCCCAAATCCAGCATCTTTGCCCATGAATCCTTCACCTAGAACCATTTCTCCGAGCTCTCCAGAAGTATCAAATGGGTCGTTCTTGCCTACTCCAGTTTCATCTCCTATTCCTCCTCATAAGATTAAGGGAATTGAACCATCCATATCTCCCAGTAGTAGTCCAACCACCATAACATTATCACCATCGAACAAGGCTGCGCCTATATCGGCAACTGGTCAAGGGAATGCACCACCACTGCAATCAATACAACCAAGTCCACCTCAAAGGAAAGCACCTCCTATTAGGCCTCCTGAATCATCTCCAATTTCTAGAGCTCAACCTCCAAAATCTTTTGGCAAGTTTCCAAATAATTCACCAGCGAGCCAACCAATCGAACCCGGAAGTTTTCCCCCTGTGGTTGAGAATAGGAATGCTAGCAAGAGTCACACCCCGAACCCAATTTCACCAGCTCCAACTGCAGTACCATCTACCAACTTGCCTACATCTTCACCAGTAAGTCAACCAGTTGAAAATGGCAGTTTCCCCCCTAATATTCACACAGAGGGTGCAAAGAAGGGTCATTCACTGAAACCGGTTGCACCGGCTCCTCTTGCAGTCATTTTGCCCAAACTTTCACCGAGTCAGCCACCTGAACATGGAAGCTTGCCTCCAACTACTCAGAAGAGTAATTCCAGTGACAGTCACAAACAGGATCCAGTTTCACAAGCTCCAGTTGCATTATCTCCTGCAACTTTGCCAGAAAATTCACCCAACGTTCATAACAGAACTGTAAATAAGGGTCTTGCTCACACTCCAACCGCAGAGCCAGCATCACCAAATTCTTTTGCATCCCCGCCATCAAAAATGGAAAATAACCAACCAGTAGGCCGTCCTGTTCTTCCAAAAGTAACTCCATCTATATCTCCTGCACAAGTTACACCACCAAAAAGTGCATATCCAATAAATCCACCACCTTTCCACCCCGTTATACCAGCAGCATCTCCATCAAAATTACCAGCACCTGCTGTCTCTCCCACACTAACACCTTCCAGAAAATCTGATTGGAAAAGTAACGGCAAACCAGTTTCAGCACCGTTGTACAAAGCACCAAAGCCATTACCAGCTATAGTACACTCCCCTGTTCAAGTCCCAGTTGCGTCACCTCCTGTGAATTTGCCCGAAAATTCACCAGTTCGCCAACCTATTCATCAAGGAAGTTTAGCTCCTGTTGTTCATAACAAAACTGAAAATAAGGGCCATATTCACACCCAAGAGCCAGCATCACCAAATTTTCTTGCATCCCCACCATGGAAAATGGAAAATAACCAATCAGTTGGCGGTCTTGTTTTTCCAGAAATAACTCCTTCCATATCACCTGCACAAGTTGCACCACCACCTTTCCACCCAGTTTCACCACCAACAGTATCTCCATCAAAATTGCCAGTACCTGATGTCTCTCCGGCAGTACCTGTTGTTGTCTCTCCGGCACTAACTCCTTCCAGAAGCTTCGATTGGAAACGTAGGGGAGAACCAGTTTCGGCACCATTGTACAAAGCACCTATGCCGCTACCAGCTGTAGTACATCCCCCTGTTCAAGCCCATGCTGTACATAATTCAAGGCAGTTTCATCATGCTCCTGCCCCTCCGGCGTCTCCTCCTAAATCTGCATCAGAAAAAGAATATCATTCTCCTGCATCTTCACCATTAACCACATCTTATAAACATCACTCTAGGAGTATAGCCACCAGCCCTGCTCCTACATCATCATATTCGGTTTCCCCTCCGACTTCAGAACACCAAGATCACCAAATTCCTCCACCACTGCCGACAACGGAACGAACACATCATGCTTCGCCACCAGCAAACACAGGCTCTACACTTTCCTCACCAGCCAGCCAGGTTTCTCCGGCTCCTTCTCCATGGTTCATAATATCTCCTCACCCAACCAAAATTCTATTTCATCCTCCTAAAGTATCTCCTTCGCGGTCTCCTGCGGAGAGTCCTAAGAAGCCAGTCCTGCCTCAAATTCACACACTGCCTCCACCACCTCCTAATGAAGATTGTTTATCAACTATTTGTTCAGAGCCCTACACAAATTCTCCACCTGGAGCACCATGCAGATGTGTCCTTCCCATGAAAGTTGGTCTTCGCCTTGATGTTTCTCTGTATACCTTCTTCCCTTTGGTTTCAGAGCTTGCTTCCGAGATTGCTGCAGGGGTTTTCATGACACAAAGTCAAGTTCGAATTATGGGAGCCGAAGCGGCAAGCCAAGATCCAGATAAAACTGATGCTCTCATCTTCTTGGTACCCATTGGGGAAGGCTTTGATCACACTACTGCCTTATTGAATTCTGAGAGATTTTGGCAGAAGAAGGTTGCAATAAAATCTTCTTACTTTGGTAGCTATGAAGTCTTGTATGTTAGCTATCCAGGTTTACCACCACCTCCTCCTCTACCACCTTCAAGCATTTCGTCGATATACGGTGGTCCATATTCAAATAATGGCAACAATGGAAGAATGATAAAGCCCCTTGGGGTGGACATACAGCAGAGGCATCACAAAGATGGACTTAGTAGGGGCATCATTGCTATTATTGCTCTCTCGGTTTTTCTTGCTCTTGTTTTATCATTGGCTGCTGGTTGGGCCTTGTTCAAGTATAGACATCATGTAAGCCAGCCAACATCAACCCCGCGTGTTTCGCCACGTTCTGTTACCAAAACACAAGGAACTACTGAATCATTAGCAGCTGGGGGAATTGCTTCAGCCTCATCATCATTTCGATCTAGCATTGCTGCTTATAAAGGATCCGCTAAGACTTTCAGTGCAAGCGACATTGAGAAAGCCAGCAATAACTTTAACGATTCAAGGATACTTGGAGAAGGTGGTTTTGGTCGGGTTTATAGTGGTATTTTTGAAGATGGGACAAAAGCAGCAATCAAGGTTCTCAAAAGGGAGGATCATCATGGTGACCGTGAATTCTTAGCTGAAGTTGAGATGCTTAGCCGCCTTCACCACAGAAATTTGGTTAAGCTTATTGGTATATGCACCGAGGTTAGCTTCCGCTGCCTGGTCTATGAACTCATCCCAAATGGCAGCGTGGAATCCCATTTACATGGTGTTGACAGGGAAAACAGTCCACTTGATTGGAGTGCTAGGATTAAGATTGCTCTCGGTGCTGCGCGTGGTCTGGCTTATCTGCATGAAGATTCAAGCCCCCCTGTCATACACAGGGACTTCAAGTCTAGTAATATCTTGTTGGAAGATGATTTTACACCAAAAGTATCTGATTTTGGATTAGCTAGAACTGCGGCCGACGAAGAGAACAGACACATATCAACCCGTGTCATGGGAACTTTTGGATATGTGGCTCCGGAGTATGCAATGACTGGCCATCTTCTTGTGAAGAGCGATGTGTACAGCTATGGTGTTGTTCTTCTTGAGCTTCTAACAGGAAGAAAACCAGTAGATATGTCGCAAGCACCCGGTCAAGAGAATCTCGTTGCATGGGCTCGTCCCTTACTCACAAGTAAAGAAGGATTGGAAGCGATAATAGACCCGTCTCTAGGGACTGATGTGCCTTGGGATAGTGTGGCCAAAGTTGCAGCCATTGCTTCAATGTGTGTTCAACCAGAGGTTTCGGACCGTCCTTTCATGGGTGAAGTTGTTCAGGCTCTAAAACTTGTGAGTAATGAATGTGATGAAGCAAAAGAAGCAGGTACAAGAAATTCTAGCCAGGAGGATTTATCTCTTGATTTGGATAATGTTTCTAGTCAACTACCAGATCATTTCCAATTCCAACGCCAATTCTCTGCCGCCAACTATACTTCTGGAAGTGATATCGAAAAAGGTTTGTCATCATTTGAGATATTCAGCTCCTCAGCAAGATTTGGAAGGCAAGATTCGGGATCTTTTCGACGTCACTCCTATTCGGCTCCTTTGAGAACCGGAAGAAAGCAGCAGTTGTGGCAGGTTATTAGCCGGCTTTCGGGTAGTGTAAGTGAACACAGAACCATCTCCAAGTTATGA 4230 0.4596 MGVGVVLSLTLQLVKLFIIGSVVTLQGSKGSVISPSPAFAPVIHPRGETLGPIHHGHWRSNAPSSPVDPDGFLLSPNPASLPMNPSPRTISPSSPEVSNGSFLPTPVSSPIPPHKIKGIEPSISPSSSPTTITLSPSNKAAPISATGQGNAPPLQSIQPSPPQRKAPPIRPPESSPISRAQPPKSFGKFPNNSPASQPIEPGSFPPVVENRNASKSHTPNPISPAPTAVPSTNLPTSSPVSQPVENGSFPPNIHTEGAKKGHSLKPVAPAPLAVILPKLSPSQPPEHGSLPPTTQKSNSSDSHKQDPVSQAPVALSPATLPENSPNVHNRTVNKGLAHTPTAEPASPNSFASPPSKMENNQPVGRPVLPKVTPSISPAQVTPPKSAYPINPPPFHPVIPAASPSKLPAPAVSPTLTPSRKSDWKSNGKPVSAPLYKAPKPLPAIVHSPVQVPVASPPVNLPENSPVRQPIHQGSLAPVVHNKTENKGHIHTQEPASPNFLASPPWKMENNQSVGGLVFPEITPSISPAQVAPPPFHPVSPPTVSPSKLPVPDVSPAVPVVVSPALTPSRSFDWKRRGEPVSAPLYKAPMPLPAVVHPPVQAHAVHNSRQFHHAPAPPASPPKSASEKEYHSPASSPLTTSYKHHSRSIATSPAPTSSYSVSPPTSEHQDHQIPPPLPTTERTHHASPPANTGSTLSSPASQVSPAPSPWFIISPHPTKILFHPPKVSPSRSPAESPKKPVLPQIHTLPPPPPNEDCLSTICSEPYTNSPPGAPCRCVLPMKVGLRLDVSLYTFFPLVSELASEIAAGVFMTQSQVRIMGAEAASQDPDKTDALIFLVPIGEGFDHTTALLNSERFWQKKVAIKSSYFGSYEVLYVSYPGLPPPPPLPPSSISSIYGGPYSNNGNNGRMIKPLGVDIQQRHHKDGLSRGIIAIIALSVFLALVLSLAAGWALFKYRHHVSQPTSTPRVSPRSVTKTQGTTESLAAGGIASASSSFRSSIAAYKGSAKTFSASDIEKASNNFNDSRILGEGGFGRVYSGIFEDGTKAAIKVLKREDHHGDREFLAEVEMLSRLHHRNLVKLIGICTEVSFRCLVYELIPNGSVESHLHGVDRENSPLDWSARIKIALGAARGLAYLHEDSSPPVIHRDFKSSNILLEDDFTPKVSDFGLARTAADEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQAPGQENLVAWARPLLTSKEGLEAIIDPSLGTDVPWDSVAKVAAIASMCVQPEVSDRPFMGEVVQALKLVSNECDEAKEAGTRNSSQEDLSLDLDNVSSQLPDHFQFQRQFSAANYTSGSDIEKGLSSFEIFSSSARFGRQDSGSFRRHSYSAPLRTGRKQQLWQVISRLSGSVSEHRTISKL 1409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip03g02450 1409 MobiDBLite consensus disorder prediction 628 667 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 155 178 - -
Aip03g02450 1409 PANTHER OS01G0750732 PROTEIN 575 1408 - -
Aip03g02450 1409 ProSitePatterns Protein kinases ATP-binding region signature. 1026 1048 IPR017441 GO:0005524
Aip03g02450 1409 MobiDBLite consensus disorder prediction 683 702 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 384 403 - -
Aip03g02450 1409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1142 1154 IPR008271 GO:0004672|GO:0006468
Aip03g02450 1409 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 575 1408 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 607 702 - -
Aip03g02450 1409 SUPERFAMILY Protein kinase-like (PK-like) 1001 1294 IPR011009 -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 316 359 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 121 154 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 90 105 - -
Aip03g02450 1409 Gene3D Transferase(Phosphotransferase) domain 1 1096 1319 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 409 425 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 289 309 - -
Aip03g02450 1409 ProSiteProfiles Protein kinase domain profile. 1020 1296 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip03g02450 1409 MobiDBLite consensus disorder prediction 721 749 - -
Aip03g02450 1409 Gene3D Phosphorylase Kinase; domain 1 992 1095 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 51 436 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 229 249 - -
Aip03g02450 1409 MobiDBLite consensus disorder prediction 179 198 - -
Aip03g02450 1409 Pfam Protein tyrosine and serine/threonine kinase 1024 1293 IPR001245 GO:0004672|GO:0006468
Aip03g02450 1409 CDD STKc_IRAK 1026 1294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip03g02450 Aip-Chr3 40704832 40718604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip03g02450 221 446 Receptor kinase-like Gene Family AT5G56890 30.702 5.87e-06 49.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Aip03g02450 PK_Tyr_Ser-Thr 1.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip03g02450 - - ccaj:109805519 1508.81